Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_022059.1 Length=77367 Score E Sequences producing significant alignments: (Bits) Value seq2224 102 4e-17 >seq2224 Length=1872321 Score = 102 bits (112), Expect = 4e-17 Identities = 198/291 (68%), Gaps = 6/291 (2%) Strand=Plus/Minus Query 68071 TGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCG 68130 ||| ||||||||||| || || || ||| ||||||||||||||||| |||| |||| Sbjct 660821 TGAAACCACCACCGGCGGCAATGCCCTGAAGTTCTACGCCTCGGTGCGCCTGGACATCCG 660762 Query 68131 CAGGATCG---CCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAA 68187 | || | ||| | | |||| |||| ||| || |||| | || ||||| || Sbjct 660761 TCGCATTGGTTCCATCAAAAAGG---GCGAAGAGATCGTGGGCAGCGAAACCCGCGTCAA 660705 Query 68188 GGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGG 68247 ||| |||||||||||| | || || || | |||| ||||| |||| | || || Sbjct 660704 GGTCGTCAAGAACAAGGTAGCCCCCCCCTTCAAGGAGGCCGAGTTCGACATCCTGTATGG 660645 Query 68248 CGAGGGCATTTCCCGCGAGGCCGAACTCCTCGACATGGCCGTTTCCCGAGGGCTCATCAA 68307 |||||| | |||||||| ||| || ||||| ||| ||| ||| || || | Sbjct 660644 CGAGGGTGTGAGCCGCGAGGGCGAGATCATCGACCTGGGCGTGGCCCACAAAATCGTCGA 660585 Query 68308 GAAGTCTGGGGCCTGGTTCAAGTACGGGGACAAGAACATCGGCCAGGGCAA 68358 ||||| || || |||| ||| | | | || || ||||||||||| Sbjct 660584 CAAGTCCGGTGCTTGGTATGCCTACAACGGCGAAAAAATTGGCCAGGGCAA 660534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 247395315744000