Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq2224 129 2e-25 seq1447 84.2 6e-12 >seq2224 Length=1872321 Score = 129 bits (142), Expect = 2e-25 Identities = 246/360 (68%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 37150 CACTTCGGCGCAAACGTGCTGGTTACCCGCAAAGGTGCTGTTCGGGCCCGCGAGGGCGAC 37209 ||||| || | | ||||| | || |||||||| || || || | || ||||||| Sbjct 869349 CACTTTGGTGAAGACGTGTTCGTGACCCGCAAGGGCGCGGTGAGCGCTAAGAAGGGCGAG 869290 Query 37210 CTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGAAAT 37269 |||||||||||||| ||| ||||| ||| | |||||| |||||| ||| || Sbjct 869289 CTGGGCATCATCCCGGGCAGCATGGGCGCGCGCAGCTACATCGTGCGCGGCCTGGGCAAC 869230 Query 37270 TCCGAAT-CGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGC 37328 | ||| | || | || |||||||||| || || || |||||||||| || | || Sbjct 869229 CCGGAAAGCTTTGAGAGCT-GCAGCCACGGCGCGGGCCGCGTGATGAGCCGCACCAAGGC 869171 Query 37329 AAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAA 37388 || |||||| || || || || ||||| ||| | || |||||||| Sbjct 869170 CAAGAAGATGTTCACCGTGGACGACCACATCCAAGCCACGGCCGGTGTGGAATGCCGCAA 869111 Query 37389 AGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGC 37448 ||| | | ||||||||||| | || ||| ||||| |||||||| ||||| ||||| Sbjct 869110 AGACGAAGCCGTGATCGACGAAATCCCCATGGCCTACAAAGACATCGACGCGGTGATGGC 869051 Query 37449 CGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGG 37508 ||||| | | ||||||| | ||||| || || || || || ||||||||||| Sbjct 869050 GGCGCAGCAGGACTTGGTGGAGGTGGTGCATACACTCAAGCAGGTGGTGTGCGTGAAGGG 868991 >seq1447 Length=1029730 Score = 84.2 bits (92), Expect = 6e-12 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 21067 GACCCCGACAGGATTCGAACCTGTGACCGTTCGCTTAGAAGGCGAATGCTCTATCCAGCT 21126 || ||||| ||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct 570779 GAGCCCGAAAGGATTCGAACCTTTGACCGTCGCCTTAGAAGGGCGATGCTCTATCCAGCT 570720 Query 21127 GAGCTACGGGGCCG 21140 |||||||| | ||| Sbjct 570719 GAGCTACGAGCCCG 570706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139253428216000