Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_023561.1 Length=173276 Score E Sequences producing significant alignments: (Bits) Value seq1 98.7 1e-15 >seq1 Length=2207822 Score = 98.7 bits (108), Expect = 1e-15 Identities = 71/82 (87%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 72104 TGGTGCCGGTTAACGGATTCGAACCGCTGACCCTCTCATTACAAATGAGCTGCTCTACCA 72163 ||||||||| | ||| ||||||| | |||| ||||||||| ||||||||||||||||| Sbjct 1862564 TGGTGCCGGAGAGAGGAGTCGAACCCCCGACCTTCTCATTACGAATGAGCTGCTCTACCA 1862505 Query 72164 ACTGAGCTAAACCGGCTTGGTG 72185 ||||||||| ||||||||| || Sbjct 1862504 ACTGAGCTACACCGGCTTGATG 1862483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554230470080000