Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq1447 176 4e-39 >seq1447 Length=1029730 Score = 176 bits (194), Expect = 4e-39 Identities = 512/785 (65%), Gaps = 14/785 (2%) Strand=Plus/Plus Query 26011 AAAAGCAATCTCTTCCAGGCATGCAACCTTCATACCTTGTTGCTTCTCTATTGCATGAAC 26070 ||| || || ||||| || ||||||||||| | |||||| || || || | ||| | Sbjct 324080 AAATGCGATTTCTTCTAGACATGCAACCTTGAGCCCTTGTCTTTTTTCAATGGTATGGAT 324139 Query 26071 AAATTGAGATGCTTCCATAAGACTTTCATGTGTTCCTGTATCCAGCCAAGTGAAACCTCT 26130 ||| | ||||| || | | | ||| || ||||| ||||||||||||| ||| |||| Sbjct 324140 AAAGTTTGATGCCTCGAGCATAGATTCGTGGGTTCCAGTATCCAGCCAAGCGAATCCTCG 324199 Query 26131 TCCTAGTTTACAGACACGTAAAGTCTTTTCTTTCCAGTACATCT-CATTTATATCCGTAA 26189 ||| | ||| ||| ||| || | || | || ||| |||| | || | Sbjct 324200 TCCCATTTTCTCTACATGTAGGGTGTCAAGGCTCAAATAT-TCTGCATTGACCGAGGTGA 324258 Query 26190 TCTCTAACTCCCCTCTAGCAGAAGGTTTAACGCTCTTAGCTTTCTGTATAACAGAATTAT 26249 | |||| || ||||| | ||||||| || | | || | | || |||||||| Sbjct 324259 TTTCTAGTTCTCCTCTGTCGGAAGGTTCGACTTTTTCTGCGATTTCTACCACAGAATTGG 324318 Query 26250 CGTAAAAGTACAAGCCTGTGATTGCGTAGTTGCtttttggtgtttttggtttttCTTCAA 26309 |||||| |||| ||| | ||| || |||||||| || ||| ||||||||||| | Sbjct 324319 GGTAAAAATACAGACCTACCACTGCATAATTGCTTTTGGGAACTTTGGGTTTTTCTTCGA 324378 Query 26310 TACTCACCACTGTACCTTCAGAATCAAACTCAACAACACCAAATCTTTCAGGATCATTTA 26369 | | || | |||| | || || || || || ||| ||||||| || |||| || Sbjct 324379 TGGAAAGGGCTTTTCCTTTTGGGTCGAAATCGACCACGCCATATCTTTCGGGGTCATCTA 324438 Query 26370 CGTGATACCCAAAGATATTAGCTCCACCATTCTTTTCAATATGTTCTTTAG---CAGAAT 26426 | | ||| ||||| | | ||| || |||||| | | | |||| | | || Sbjct 324439 CATAATAGCCAAACACGGTGGCT------TTGTTTTCAGTTTCTGCTTTGTGTACCGCAT 324492 Query 26427 CTAAAATGCTACCAAAA---CTCTGACCAAAGAATAAATTATCACCTAGCACAAGTGCTA 26483 | || ||| || | | ||| | || | || || || | || | | Sbjct 324493 TTTGAAGCAGACCCGAAAGTCCCGTTCCATAAAAAATGTTGTCTCCCAAAACCAAACAAA 324552 Query 26484 CAGAATCTTCACCAATAAAGTTCTCACCAATAATAAACGCTTCTGCTAAACCTTTTGGGC 26543 ||||||| || || ||||| | | || | ||| || || | || || || | ||| Sbjct 324553 CAGAATCATCCCCGATAAATTCTTTTCCCAAAATGAAGGCCTGAGCCAAGCCATCAGGGG 324612 Query 26544 TATCCTGTATTGCATACTGTAGGGAAATACCAAAAGAAGAACCATCACCTAGAAGATTTA 26603 | ||||| | || ||||||||| || || ||||| || || | || ||| Sbjct 324613 AAGGCTGTACTTTGTAGCTTAGGGAAATGCCCAAGTTGGAACCGTCTCCCAAGAGTTTTT 324672 Query 26604 CAAAATTAATTTGATCTTCTGGTGTTGTAATTATTAGTATTTCCCTAATTCCAGAAAGCA 26663 |||| || | ||||| || |||| || || || ||||| | ||||||| |||| Sbjct 324673 CAAAGTTTGGTAAGTCTTCAGGGGTTGAGATAATCAGAATTTCACGGATTCCAGCCAGCA 324732 Query 26664 TTAGGACAGAGAGTGGATAATAAATCATAGGTTTATCGTAAATTGGTAATAGTTGTTTAC 26723 | | || || || |||||||| | ||| ||||| || ||||| | || || ||||| Sbjct 324733 TCAAAACCGAAAGGGGATAATAGACCATGGGTTTGTCATAAATGGCCAAAAGCTGTTTGG 324792 Query 26724 TAACCCCTTTAGTAACTGGGTAAAGCCTTGTTCCACTACCACCTGCTAAGATAATACCTT 26783 ||||||||| || | ||||||||||||||||||| || ||||| | || || |||| Sbjct 324793 AAACCCCTTTGGTCAGTGGGTAAAGCCTTGTTCCAGAGCCTCCTGCAAGTATTATTCCTT 324852 Query 26784 TCATA 26788 ||||| Sbjct 324853 TCATA 324857 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475323428160000