Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_024366.1 Length=62661 Score E Sequences producing significant alignments: (Bits) Value seq2224 82.4 3e-11 >seq2224 Length=1872321 Score = 82.4 bits (90), Expect = 3e-11 Identities = 135/194 (70%), Gaps = 8/194 (4%) Strand=Plus/Minus Query 54243 GTGTGGGTGACCCGCAAGGGCGCCATCAGCGCGCAACTCGGTGAGCGTGGCCTCATCCCC 54302 |||| ||||||||||||||||| | ||||| | || |||| ||| ||||||| Sbjct 869334 GTGTTCGTGACCCGCAAGGGCGCGGTGAGCGCTAAGAAGGGCGAGCTGGGCATCATCCCG 869275 Query 54303 GGCAGCATGGGCACGGCCTCCTACGTCGTCACCGGTAAAGGCAACCCCGAAGGGCTGCAT 54362 |||||||||||| || | |||| |||| ||| |||||||| ||| || | Sbjct 869274 GGCAGCATGGGCGCGCGCAGCTACATCGTGCGCGGCCTGGGCAACCCGGAA----AGCTT 869219 Query 54363 TCCGCGCCG----CACGGCGCCGGCCGCCGCTACTCCCGCACCAAGGCACGCAAGCTGTT 54418 | | || | |||||||| |||||| |||||||||||| ||| |||| Sbjct 869218 TGAGAGCTGCAGCCACGGCGCGGGCCGCGTGATGAGCCGCACCAAGGCCAAGAAGATGTT 869159 Query 54419 CACCGTCGACGACC 54432 |||||| ||||||| Sbjct 869158 CACCGTGGACGACC 869145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200346439356000