Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq2447 89.7 2e-14 seq17724 87.8 6e-14 seq11693 87.8 6e-14 seq10337 87.8 6e-14 seq9560 87.8 6e-14 seq1148 87.8 6e-14 >seq2447 Length=520522 Score = 89.7 bits (98), Expect = 2e-14 Identities = 79/98 (81%), Gaps = 7/98 (7%) Strand=Plus/Plus Query 2736 ATGATACAATGACATCTTTGTACTGTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCAT 2795 |||||||||||| ||||| ||| || || | |||||||||||||||||| | Sbjct 311245 ATGATACAATGAGCGCTTTG--CTGCGT-----GCCTAGATAGCTCAGTTGGGAGAGCGT 311297 Query 2796 TAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 ||||||||||||||||||||||| ||||| | |||||| Sbjct 311298 TAGACTGAAGATCTAAAGGTCCCCGGTTCGATCCCGGG 311335 >seq17724 Length=184246 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||| Sbjct 158102 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCGATCCCGGG 158159 >seq11693 Length=278974 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||| Sbjct 132602 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCGATCCCGGG 132659 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 || ||||||||||||||| ||||||||||||||||| ||||||||||| | |||||| Sbjct 120766 TAACTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAGTGTCCCTGGTTCGATCCCGGG 120709 >seq10337 Length=817788 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||| Sbjct 264834 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCGATCCCGGG 264891 >seq9560 Length=389390 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||| Sbjct 148922 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCGATCCCGGG 148865 >seq1148 Length=128528 Score = 87.8 bits (96), Expect = 6e-14 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGG 2833 |||||||||||||||||| |||||||||||||||||||||||| ||||| | |||||| Sbjct 100814 TAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCGATCCCGGG 100757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15846479610000