Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq16236 154 2e-32 seq9774 145 9e-30 >seq16236 Length=166078 Score = 154 bits (170), Expect = 2e-32 Identities = 151/195 (77%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 |||||||||||| || || || | |||| |||||||||| | |||||||| ||||| || Sbjct 14959 CTTAAGGCCGGTGACCTGAGCGATCATGCAGGTGAGCAGAGCATAGCTGGCGATGTTAAA 14900 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || ||||||||||| | || | |||||||||||| || || ||||| || | Sbjct 14899 TGGCACACCGAGGCCCATGTCAGCAGATCGCTGGTACAGCTGACAAGACAGCTCGCCATT 14840 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 ||| ||||||||||| |||| | ||||| || ||||| ||||| | || | ||| || Sbjct 14839 GGCAACGTAAAACTGACACAAGCAATGGCAGGGAGGCAGTGCCATTTCAGGGATGTCAGC 14780 Query 147162 GGGGTTCCAGGCCGA 147176 |||||||| || || Sbjct 14779 TGGGTTCCAAGCAGA 14765 >seq9774 Length=82367 Score = 145 bits (160), Expect = 9e-30 Identities = 149/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041 |||||||||||| || || || | |||| |||||||||| | |||||||| ||||| || Sbjct 80899 CTTAAGGCCGGTGACCTGAGCAATCATGCAGGTGAGCAGAGCATAGCTGGCGATGTTAAA 80958 Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101 || || || |||| |||||| | || | |||||||||||| || || | ||| || | Sbjct 80959 TGGCACGCCGAGGCTCATGTCAGCAGATCGCTGGTACAGCTGACAAGACAACTCGCCATT 81018 Query 147102 GGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGC 147161 ||| ||||||||||| |||| | ||||| || ||||| ||||| | || | ||| || Sbjct 81019 GGCAACGTAAAACTGACACAAGCAATGGCAGGGAGGCAGTGCCATTTCAGGGATGTCAGC 81078 Query 147162 GGGGTTCCAGGCCGA 147176 |||||||| || || Sbjct 81079 TGGGTTCCAAGCAGA 81093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583356715200000