Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq10358 105 9e-18 >seq10358 Length=34033 Score = 105 bits (116), Expect = 9e-18 Identities = 130/178 (73%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 39603 GTTTAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGT 39662 |||| |||| | |||||| |||||| || ||||||||||| | || | |||| Sbjct 94 GTTTGTACATGAGGCAGGCAAAGTCAGTGTGCAGGCCCTCATCACGTGAGATGAGCTCGT 153 Query 39663 TAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAG 39722 | || || || || ||||| || || ||||| || ||||| || || | |||||||| Sbjct 154 TGCTGAAAGTCAGACCCGGCATGAGGCCGCGCTTCTTCAGCCAGAAAATCGAAGCAAAAG 213 Query 39723 ATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACT 39780 |||| || ||||| || || || ||||| ||||| || || | |||||| ||||||| Sbjct 214 ATCCCGAGAAGAAAATCCCCTCCACTGCGGCAAACGCCACTATTCTCTCCGCGTAACT 271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686754245520000