Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq2224 123 4e-23 >seq2224 Length=1872321 Score = 123 bits (136), Expect = 4e-23 Identities = 188/265 (71%), Gaps = 2/265 (1%) Strand=Plus/Minus Query 198335 TGTCAGCTCTATCAACGCAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAACATCGCGTCT 198394 || |||||||| || ||||| || ||| | || | |||||||| |||||||| || Sbjct 1212252 TGCCAGCTCTACCAGCGCAGCGCCGATATCTTTTTGGGCGTGCCCTTCAACATTGCCAGC 1212193 Query 198395 TACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGCGATTTCATT 198454 ||||| || || |||||| | ||||||||| || ||| ||| |||||||| Sbjct 1212192 TACGCGTTGCTGACCCACATGCTGGCCCAGCAGTGCGACTTGGACGTGGGTGATTTCATC 1212133 Query 198455 TGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGC-AGGCCAAGCTCCAGCT 198513 ||||||||||| ||| || |||||| | ||||| | |||| || ||| | ||||| Sbjct 1212132 TGGACGGGCGGCGACTGCCACCTCTACACCAATCACTTCGAGCAAGTGCAAAC-GCAGCT 1212074 Query 198514 GACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAATCTATCTT 198573 |||| ||| || | | ||| |||| ||||||||| || || | || ||||| Sbjct 1212073 AGCGCGCACGCCCTTTGCCTACCCGGTGCTGAACATCAAGCGCAAGCCCGCGTCCATCTT 1212014 Query 198574 CGATTATAAATTCGAAGATTTTGAG 198598 ||| || | |||||||| |||||| Sbjct 1212013 CGACTACGAGTTCGAAGACTTTGAG 1211989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769020531440000