Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_028656.1 Length=65955 Score E Sequences producing significant alignments: (Bits) Value seq16548 120 1e-22 >seq16548 Length=1313 Score = 120 bits (132), Expect = 1e-22 Identities = 416/637 (65%), Gaps = 23/637 (4%) Strand=Plus/Minus Query 33028 AGCAATCGTCGATTGTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCCACTTCTGCA 33087 |||| ||| || | ||| ||||||| ||||| | || |||||| || || || || Sbjct 1192 AGCAGTCGGCGGTGGTTGAACCAGTCGACCCAGTTCAGCGTGGCCCACTCGACGTCGTCA 1133 Query 33088 CGGTTTTTCCAGCTCTTACGG---TGTATTACCTCCGCTTTGTAAAGACCATTGATGCTC 33144 || |||| | | ||| || || ||||| || ||||| || || |||| | Sbjct 1132 TGGCGCGGCCAGGACGTCCGGCGGTGAATGACCTCGGCCTTGTAGAGGCCGATGATCGAC 1073 Query 33145 TCAGCCATCGCGTTGTCATACGAGTCGCCTGTACTCCCTGTTGATGCCAGTAATCCGGCT 33204 || |||| |||||||| || |||||||| || || || | | | || || Sbjct 1072 TCGGCCAGGGCGTTGTCGTAGGAGTCGCCGACGCTACCGACAGAAGGCTCCAGGCCAGCC 1013 Query 33205 TCTTTTAGTCGCTCCGTATAGGCCAGTGACA-CATACTGAGAGCCTTTATCGCTGTGATG 33263 || || ||||| || || | | | || |||| || || || |||||||| || Sbjct 1012 TCCGCAAGCCGCTCGGTGTAC-CGAATCCCAACATATTGCGAACCGCGGTCGCTGTGGTG 954 Query 33264 GAT-----GGTGCCAGACGGACGAC----GGGCCCACAACGCCTGCTCCAGCGCATCCAG 33314 || ||| | | || | | | |||| ||| |||||||||||||||||| || Sbjct 953 AATCAGCCGGTCGCCGCCGAAAGGCTTGCGGGCATACAGCGCCTGCTCCAGCGCATCGAG 894 Query 33315 CACGAATGTCGTTTCCATA-GACGATGAGACCCGCCACCCCACGATGTATCCGGCAAACA 33373 |||||| |||| ||| || | ||| |||||| || ||||| | |||| | | Sbjct 893 CACGAA-GTCGGTTCGGGCCGAGGTCGAGGACCGCCAGCCGACGATCCGGCGGGCATAGA 835 Query 33374 CATCAATGATAAACGCCACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAG 33433 |||| |||| || || || ||| | ||||| || | || ||||||||| || ||| Sbjct 834 CATCGATGACGAAGGCGACGTAGGCAAAGCCTTGATAGGTCGAGACGTAAGTGAAGTCAC 775 Query 33434 CCACCCACAGCTGGTCAGGTCGTTCTGCCACGAACTGACGGTTTACGCGGTCGCCTGCGG 33493 ||||||||||||| || || || ||| |||||| || | ||| | || || || Sbjct 774 TGACCCACAGCTGGTTCGGCCGATCCGCCCGGAACTGGCGCTGGACGTGATC-TCTAGGG 716 Query 33494 CAACG-GCTTT---CCGGCTGATGGTCGTACGGACCTTTTTACCCCGGAGAACACCGGCA 33549 || | || || | |||||| ||||| || || | || || || | || ||| Sbjct 715 CACGGCGCATTCGGCTGGCTGAGCGTCGTCCGCACGGTCTTGCCGCGCACCACGCCGCGC 656 Query 33550 AGTCCCATAACCGC-CATGAGACGTGCCACTGTACATCTGGCCACCCTGATTCCTTCCCG 33608 || |||| | || ||| || || || || || || | |||||| || | ||| || Sbjct 655 AGCCCCA-CGCGGCGCATCAGTCGGGCGACCGTGCAGCGCGCCACCGCCATCCGTTCGCG 597 Query 33609 TAACAACTGACGCCAGACTTTACGCACACCGTACACC 33645 |||||| |||||||| || || || || || ||| Sbjct 596 GTGCAACTGCCGCCAGACCTTGCGAACGCCATAGACC 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 210884926968000