Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq1 122 3e-23 >seq1 Length=2207822 Score = 122 bits (134), Expect = 3e-23 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 4880 GTCTACCGCGAGGTGGACCCCAACGAGCTGTGGGACGCGGTCATGCGCTCCACCTGGGAC 4939 ||||| ||| || || | || | |||||||||| | ||||||||||||||| ||| Sbjct 722687 GTCTATCGCAAGCTGCCCGCCCGGGCGCTGTGGGACCAGATCATGCGCTCCACCTACGAC 722746 Query 4940 TGGGCCGAGCCGGGCGTCCTGTTCATCGACCGCATCAACGAGATGAACAACCTCCACTAC 4999 |||||||| ||||| |||||| | |||||||||||| | ||||||||| |||| Sbjct 722747 CATGCCGAGCCCGGCGTGCTGTTCTTGGACCGCATCAACCAAGACAACAACCTCAGCTAC 722806 Query 5000 TGCGAGACCATCGCGGCGACCAACCCGTGCGGCGAGCAGCCGCTGCCACC 5049 ||||| ||| | || |||||||| || | |||||||||||||| || Sbjct 722807 TGCGAAGACATTTCTGCCACCAACCCTTGTGCGGAGCAGCCGCTGCCTCC 722856 Score = 122 bits (134), Expect = 3e-23 Identities = 129/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 4880 GTCTACCGCGAGGTGGACCCCAACGAGCTGTGGGACGCGGTCATGCGCTCCACCTGGGAC 4939 ||||| ||| || || | || | |||||||||| | ||||||||||||||| ||| Sbjct 725222 GTCTATCGCAAGCTGCCCGCCCGGGCGCTGTGGGACCAGATCATGCGCTCCACCTACGAC 725281 Query 4940 TGGGCCGAGCCGGGCGTCCTGTTCATCGACCGCATCAACGAGATGAACAACCTCCACTAC 4999 |||||||| ||||| |||||| | |||||||||||| | ||||||||| |||| Sbjct 725282 CATGCCGAGCCCGGCGTGCTGTTCTTGGACCGCATCAACCAAGACAACAACCTCAGCTAC 725341 Query 5000 TGCGAGACCATCGCGGCGACCAACCCGTGCGGCGAGCAGCCGCTGCCACC 5049 ||||| ||| | || |||||||| || | |||||||||||||| || Sbjct 725342 TGCGAAGACATTTCTGCCACCAACCCTTGTGCGGAGCAGCCGCTGCCTCC 725391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187476718284000