Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_029119.1 Length=127726 Score E Sequences producing significant alignments: (Bits) Value seq11737 109 4e-19 >seq11737 Length=277544 Score = 109 bits (120), Expect = 4e-19 Identities = 195/282 (69%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 126090 TAAATATGTGCATCTCCAAATGTATGAATGAATTCACCCACCTCAAGTCCACATTCTTTT 126149 ||||| |||||||| ||||| |||| |||||||| || | | ||| || | ||| Sbjct 158733 TAAATGTGTGCATCGCCAAAACTATGGATGAATTCTCCAGCTTTAAGCCCTGTTACTTGA 158674 Query 126150 GCAACAAG-ATGTGTCAGTAAAGCATAACTTGCAATATTGAAAGGAACACCTAAAAATAT 126208 || || | || | |||| |||||| ||||| || || ||||| || ||||| | Sbjct 158673 GCCACCATCATAAGA-AGTAGGGCATAAGAAGCAATGTTAAAGGGAACGCCCAAAAAGGT 158615 Query 126209 ATCAGCACTTCTTTGATATAATTGACAATTTAATTTACCCTCTTGTACGTAAAATTGAAA 126268 ||| ||||||||||| || | || |||||| || || || ||||| ||||| Sbjct 158614 ATCTGCACTTCTTTGGTAGAGCTGTAGCGATAATTTTCCATCGGCCACATAAAACTGAAA 158555 Query 126269 CATTGTGTGGCAAGGTGGTAATGCCATTGAATCGATTTCAGTAGGATTCCATGCTGAAAC 126328 || ||||||||| | | ||||||| ||| |||| | |||||| || ||||| Sbjct 158554 CAAGCAGTGGCAAGGAGCCAGTGCCATTTGATCTATTTGCGCCACATTCCAAGCCGAAAC 158495 Query 126329 AATGTGACGTCGAGAGTTTGGATTGGTTTTAATTTGTTGTAT 126370 |||| | | || ||| | |||||| |||| || | || ||| Sbjct 158494 AATGAGTCTTCTAGAATCAGGATTGCTTTTGATGTCTTCTAT 158453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408508763726000