Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq16236 147 2e-30 seq9774 138 9e-28 >seq16236 Length=166078 Score = 147 bits (162), Expect = 2e-30 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || |||||||| ||||| |||||| | ||||| |||| ||||||||||||||||| ||| Sbjct 14955 AGGCCGGTGACCTGAGCGATCATGCAGGTGAGCAGAGCATAGCTGGCGATGTTAAATGGC 14896 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || ||||| |||||||| | || | |||||| ||||| || || ||||| || | | Sbjct 14895 ACACCGAGGCCCATGTCAGCAGATCGCTGGTACAGCTGACAAGACAGCTCGCCATTGGCA 14836 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 |||||||||||||||| | |||||| ||||| || ||||| Sbjct 14835 ACGTAAAACTGACACAAGCAATGGCAGGGAGGCAGTGCCAT 14795 >seq9774 Length=82367 Score = 138 bits (152), Expect = 9e-28 Identities = 127/161 (79%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || |||||||| ||||| |||||| | ||||| |||| ||||||||||||||||| ||| Sbjct 80903 AGGCCGGTGACCTGAGCAATCATGCAGGTGAGCAGAGCATAGCTGGCGATGTTAAATGGC 80962 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || ||||| | |||||| | || | |||||| ||||| || || | ||| || | | Sbjct 80963 ACGCCGAGGCTCATGTCAGCAGATCGCTGGTACAGCTGACAAGACAACTCGCCATTGGCA 81022 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 |||||||||||||||| | |||||| ||||| || ||||| Sbjct 81023 ACGTAAAACTGACACAAGCAATGGCAGGGAGGCAGTGCCAT 81063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406074097948000