Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_030909.1 Length=50183 Score E Sequences producing significant alignments: (Bits) Value seq2224 114 4e-21 >seq2224 Length=1872321 Score = 114 bits (126), Expect = 4e-21 Identities = 164/227 (72%), Gaps = 7/227 (3%) Strand=Plus/Minus Query 33987 GCCGTTGCGGTGCTTCGCGATGATCAACTCAGCCACGCCGCGGTACTGGG----TGTCCG 34042 |||||| || ||||| ||||||| | || ||| ||| ||| ||| | | || Sbjct 1509727 GCCGTTACGCTGCTTGCCGATGATGATTTCGGCCGTGCC-CGGCACTTTGGAGTTCTCGC 1509669 Query 34043 GGTGATAGACCTCGTCTCGGTACACGAACATGATCACGTCGGCGTCCTGCTCGATCGCCC 34102 ||| ||| || || || || | ||||||||||||||| |||||||||||||| || | Sbjct 1509668 GGTTGTAGTAGTCATCGCGATAGATGAACATGATCACGTCCGCGTCCTGCTCGATAGCGC 1509609 Query 34103 CGGACTCGCGCAGGTCCGACATCATCGGTCGCTTGTTCGGCCGCTGCTCCAGGGAGCGGT 34162 | ||||| |||||||| |||||| || ||||||| ||||| || | |||| Sbjct 1509608 CCGACTCCCGCAGGTCGCTCATCATGGGCCGCTTGTCAGGCCGAGTTTCAACACTTCGGT 1509549 Query 34163 TGAGCTGCGACAGCACGATCAC-GGGGATACCAAGCTCCATGGCCAG 34208 ||||||| |||||| | ||||| ||| | ||| |||| ||||||| Sbjct 1509548 TGAGCTGAGACAGCGCAATCACAGGGCAGTTCAA-CTCCTTGGCCAG 1509503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160429700820000