Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq2224 120 5e-22 >seq2224 Length=1872321 Score = 120 bits (132), Expect = 5e-22 Identities = 189/267 (71%), Gaps = 8/267 (3%) Strand=Plus/Minus Query 203296 TGTCAGTTGTATCAGCGCAGCGCCGATGTCTTCTTAGGCGTGCCGTTTAACATCGCCTCG 203355 || ||| | || ||||||||||||||| |||| || |||||||| || ||||| ||| Sbjct 1212252 TGCCAGCTCTACCAGCGCAGCGCCGATATCTTTTTGGGCGTGCCCTTCAACATTGCCAGC 1212193 Query 203356 TATGCTTTACTGACTGAGATGGTTGCTCAGCAGGTCAACATGGTGGCCGAGGAGTTCGTC 203415 || || || ||||| | ||| | || |||||| | || ||| | | || ||| || Sbjct 1212192 TACGCGTTGCTGACCCACATGCTGGCCCAGCAGTGCGACTTGGACGTGGGTGATTTCATC 1212133 Query 203416 TGGACAGGCGGTGATACACATCTGTATTCCAACCATCTGGAGCAGGCCCGTCTGCAGTTA 203475 ||||| ||||| || || || || |||| || | ||||| | | |||| || Sbjct 1212132 TGGACGGGCGGCGACTGCCACCTCTACACCAATCACTTCGAGCAAGTGCAAACGCAGCTA 1212073 Query 203476 ACTCGTGACCCGCACCCAT---TACCGCGT-CTGAAATTCAAACGTAAGCCCGAGTCTAT 203531 | || | ||| || | |||| || ||||| |||| || ||||||| ||| || Sbjct 1212072 GCGCG---CACGC-CCTTTGCCTACCCGGTGCTGAACATCAAGCGCAAGCCCGCGTCCAT 1212017 Query 203532 CTTCGACTACCAGTTCGAAGACTTTGA 203558 |||||||||| |||||||||||||||| Sbjct 1212016 CTTCGACTACGAGTTCGAAGACTTTGA 1211990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788142628000000