Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_031020.1 Length=163201 Score E Sequences producing significant alignments: (Bits) Value seq13448 82.4 8e-11 >seq13448 Length=225520 Score = 82.4 bits (90), Expect = 8e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 64081 TTTGGCAGCGGGTGTGAGATTCGAACTCACGGAACGGTTTCCCGTCCTCTGGTTTTCAAG 64140 |||||| | | ||||||||||||||||||| | |||||||| | | || ||||||||| Sbjct 108822 TTTGGCGGAAGCGGTGAGATTCGAACTCACGGTAAGGTTTCCCCTACGCTAGTTTTCAAG 108881 Query 64141 ACCAGCGCCATAAGCCTCTCGGCCA 64165 || || ||| ||| || |||||||| Sbjct 108882 ACTAGAGCCTTAAACCACTCGGCCA 108906 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521997724080000