Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq10494 156 6e-33 >seq10494 Length=32657 Score = 156 bits (172), Expect = 6e-33 Identities = 421/643 (65%), Gaps = 31/643 (5%) Strand=Plus/Minus Query 77129 AAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 77188 ||| |||||||| | |||||| | ||||| ||||| |||||| || || | | || Sbjct 5049 AAACTCTCCAGAAAGTACTCTTCTGGTGTAGATATTGGAGGTATAAGGCTCAAAGCACTC 4990 Query 77189 ATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATT 77248 ||||||||| | || || ||||| || |||||||| || |||| ||| || ||| Sbjct 4989 ATTGTTTCCAAGTATCTGGCTGGTAGATGCTGTTGGCATTGGAGCCAACAACAAGGAATT 4930 Query 77249 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAA-- 77306 ||| | |||||| | | | || ||| | ||| | ||| ||||||||| ||||| Sbjct 4929 TCTCACCCCATGTTTAATTACCTTTTCTCTGAGAGCCTCCCAGTCCCAAAGACCTGAATC 4870 Query 77307 -GGTACAACATCCCAAAGATCGTATTGTAGAATT--CCGTTACTAGCATATGATCCATTA 77363 || |||| |||| | |||| |||| ||||| || || | | || || | Sbjct 4869 TGGAGTAACACCCCACATATCGAATTG--GAATTGGCCTTTCGAAATAGGCGAACCCTCC 4812 Query 77364 TATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAA 77423 | ||||| || | || ||| | |||||||| | ||||||| || || || Sbjct 4811 CAAGTTTCGTAGGTACCCTCTTCTATTGCTAGTTCCATAGAGGCTTCCATTGAGGCGAAA 4752 Query 77424 TAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGC---TTCAATACTATCAAACGGA 77480 || || || || ||||| | ||| || || | ||| || ||| ||| ||||| || Sbjct 4751 TAGATGGTCTCAAAAATGTCCTTGTTCAGTTTTTGAGCCGGTTC---ACTGTCAAATGGC 4695 Query 77481 TAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGT 77540 | | | || ||||| ||||| || || |||| |||||||| ||||||||||| Sbjct 4694 ATCTTCATCATTATGAAGGCGTCTGCCAAACCTTGAATACCAATACCTATAGGTCTATGA 4635 Query 77541 CTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTG 77600 | ||||||| | | ||||| || | ||||| ||||| | ||| || ||||| ||| Sbjct 4634 CGCTTATTGCTTTTCTCGGCTTCAGGTACCGGATAGTAATTTACGTCGATGATTTTGTTG 4575 Query 77601 AGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGAAAATCAAATCTT------ 77654 || || | || || || | || | ||||| ||||| || ||| Sbjct 4574 AGGTTACGCGTAATCACCTTGGTGATATCGTAAAGTTTTTTGAAATCGAAGCTTATTGCC 4515 Query 77655 ------CCATC------TATAACAAACATGTTCAAAGCTATAGATGCTAGATTACAAACT 77702 ||||| ||||||||| | | ||||||||| || | |||||||||| Sbjct 4514 TCATTGCCATCGGTGTTGATAACAAACTTCGGTAGAGCTATAGAGGCCAAATTACAAACT 4455 Query 77703 GCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATA 77745 || ||||||| || || |||| || || |||||||||| Sbjct 4454 GCCACCTCATCAGGAGCGGTGTATTCGATGATTTCGGTACATA 4412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694512499520000