Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq10494 125 1e-23 >seq10494 Length=32657 Score = 125 bits (138), Expect = 1e-23 Identities = 321/485 (66%), Gaps = 13/485 (3%) Strand=Plus/Minus Query 75724 AAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTC 75783 ||| |||||||| | |||||||| ||||| ||||| |||||| || || | | || Sbjct 5049 AAACTCTCCAGAAAGTACTCTTCTGGTGTAGATATTGGAGGTATAAGGCTCAAAGCACTC 4990 Query 75784 ATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATT 75843 ||||||||| | || || || || || || ||||| || |||| ||| || ||| Sbjct 4989 ATTGTTTCCAAGTATCTGGCTGGTAGATGCTGTTGGCATTGGAGCCAACAACAAGGAATT 4930 Query 75844 TCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGA--- 75900 ||| | |||||| | | | || ||| | ||| | ||| ||||||||| |||| Sbjct 4929 TCTCACCCCATGTTTAATTACCTTTTCTCTGAGAGCCTCCCAGTCCCAAAGACCTGAATC 4870 Query 75901 TGGTACAACATCCCAGAGATCGTATTGTAGAATT--CCGTTGCTAGCATATGATCCATTA 75958 ||| |||| |||| | |||| |||| ||||| || || | | || || | Sbjct 4869 TGGAGTAACACCCCACATATCGAATTG--GAATTGGCCTTTCGAAATAGGCGAACCCTCC 4812 Query 75959 TATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAA 76018 | |||||||| || || || | | |||||||| | || || | | || || Sbjct 4811 CAAGTTTCGTAGGTACCCTCTTCTATTGCTAGTTCCATAGAGGCTTCCATTGAGGCGAAA 4752 Query 76019 TAAATTGTTTCGAAAATCTTCTTATTAAGATCTTG---CGCTTCAAGACTATCAAAAGGA 76075 || || || || ||||| | ||| || || | ||| || ||| ||| ||||| || Sbjct 4751 TAGATGGTCTCAAAAATGTCCTTGTTCAGTTTTTGAGCCGGTTC---ACTGTCAAATGGC 4695 Query 76076 TAATGTAAAAGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGT 76135 | | | || || || ||||| | || |||| |||||||| ||||||||||| Sbjct 4694 ATCTTCATCATTATGAAGGCGTCTGCCAAACCTTGAATACCAATACCTATAGGTCTATGA 4635 Query 76136 CTCTTATTGGAAATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTG 76195 | ||||||| | || ||||| || | || || ||||| | || || ||||| ||| Sbjct 4634 CGCTTATTGCTTTTCTCGGCTTCAGGTACCGGATAGTAATTTACGTCGATGATTTTGTTG 4575 Query 76196 AGATT 76200 || || Sbjct 4574 AGGTT 4570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712773989760000