Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyalella_20azteca_20[refseq_20GCF_5F000764305.1_202016-07-20] 18,000 sequences; 550,885,727 total letters Query= NC_031097.1 Length=52077 Score E Sequences producing significant alignments: (Bits) Value seq10046 80.6 9e-11 >seq10046 Length=39565 Score = 80.6 bits (88), Expect = 9e-11 Identities = 84/108 (78%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 45246 GCGGTGATGAGCGACCACACC-AGCATCGAGTGGACCGACGCCACCTGGAACCCGGTCAC 45304 || || ||| ||||| ||| | | |||||||||||||| || ||||| ||| || Sbjct 36722 GCAGTCATG-GCGACGACATCGAAGATCGAGTGGACCGAGCAGACATGGAATCCGACGAC 36664 Query 45305 CGGCTGCACCAAGGTCAGCCCCGGATGCGATCACTGCTACGCCGAGAC 45352 ||| ||||||||| ||||||| || ||| | |||||||||||||| || Sbjct 36663 CGGGTGCACCAAGATCAGCCCGGGCTGCAAGCACTGCTACGCCGAAAC 36616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166489205324000