Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq4069 87.8 1e-12 >seq4069 Length=4271 Score = 87.8 bits (96), Expect = 1e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 20487 TATGGGACTGGGTGTTCCTTTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGC 20546 || ||| || || |||||||| || || || |||||| | || | || ||||||| || Sbjct 2889 TAAGGGTCTCGGAGTTCCTTTTAACATCGCGAGTTATTCATTGTTGACTCATATGATCGC 2830 Query 20547 ACATGTTACAGATTTAAAAACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTA 20606 |||| | || | ||||| ||||| || || || || || |||||||||||||| || Sbjct 2829 ACATATCACTAAACTAAAATGTGGTGATTTCGTACATACAATTGGAGACGCGCATATATA 2770 Query 20607 CCTTAATCATATAGAACCTTTAAAATTACAG 20637 | ||||||| |||||| | ||| |||| Sbjct 2769 TTTGGATCATATCGAACCTCTTAAAGAACAG 2739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398500707890305