Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq32426 89.7 4e-13 >seq32426 Length=2656 Score = 89.7 bits (98), Expect = 4e-13 Identities = 160/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 18096 TATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCG 18155 || ||||| || || | | || | |||||| || ||||| |||||||| |||||||| Sbjct 204 TAACCTCCGCGCAGACGCAAGACGAGGTGAAGAGTCGATTCCTTTTGAATATTGTAGTCC 263 Query 18156 GCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACG 18215 | | || | || ||||||||||| || ||| |||| || | ||||||||| Sbjct 264 GAGAGAGTACGGCCGTCCTCCAATTGTTTTCCGGCAAAGATCAGACGCTGTTGATCCGGA 323 Query 18216 GGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTC 18274 || | || || ||||| ||||| | || ||||| | ||| ||||| ||| || Sbjct 324 GGAATCCCCTCTTTATCTTGAATTT-TGGCTTTGACATTCTCAATGGTGTCTGAGGGTTC 382 Query 18275 GGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | ||||| |||||||| | | |||||| || || |||||||| Sbjct 383 CACTTCCAAAGTGATAGTTTTGCCGATGAGTGTTTTCACGAATATTTGCAT 433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378694668458505