Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06]
140,449 sequences; 172,365,132 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq21107 96.9 3e-15
>seq21107
Length=15695
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| ||||| | | ||| ||||| || || || |||||||||||| || ||||| | |
Sbjct 13941 CCCCCGCGGAGACGTAAGACTAAGTGGAGAGTCGACTCCTTTTGAATATTATAATCGGAC 13882
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| | || | || || || || || ||| || |||| || ||||||||||| ||
Sbjct 13881 AGTGTACGTCCATCTTCGAGTTGTTTTCCGGCGAAAATCAATCGCTGCTGATCGGGGGGA 13822
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| || || || || |||||| ||| | | | | ||||||||| | | |||
Sbjct 13821 ATACCCTCTTTATCTTGAATTTTGGCCTTAACATTCTCAATGGTATCGCTCGGCTCAACT 13762
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|| | ||| |||||||| ||||||||||| || || || || ||||||
Sbjct 13761 TCCAATGTAATGGTTTTGCCGGTGAGAGTCTTGACGAAGATTTGCATC 13714
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48500 CCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCC 48559
|| ||||| | | ||| ||||| || || || ||||||||| || || ||||| | |
Sbjct 14786 CCCCCGCGGAGACGTAAGACTAAGTGGAGAGTCGACTCCTTTTGGATATTATAATCGGAC 14727
Query 48560 AATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGC 48619
| | || | || || || || || ||| || |||| || ||||||||||| ||
Sbjct 14726 AGTGTACGTCCATCTTCGAGTTGTTTCCCGGCGAAAATCAATCGCTGCTGATCGGGGGGA 14667
Query 48620 ACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTC 48679
| || || ||||| |||||| ||| | | | ||||||||| | | ||
Sbjct 14666 ATACCCTCTTTGTCTTGAATTTTGGCCTTTACATTTTCGATGGTATCGCTCGGTTCAACT 14607
Query 48680 TCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATC 48727
|| | ||| ||||||||||||||||| ||||| ||||| || ||||||
Sbjct 14606 TCCAATGTAATGGTTTTACCGGTGAGTGTTTTGACAAAGATTTGCATC 14559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420530134974449
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |