Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq5884 96.9 4e-15 >seq5884 Length=32987 Score = 96.9 bits (106), Expect = 4e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 31307 CTCGGGAACATAGAGGCTCGTCGAGATTGGGGTCATGCGAAGGACTACGTGGAGGCCATG 31366 ||||| || | || | || || || ||||||||||||||||| || || ||||| ||| Sbjct 22449 CTCGGAAATCTCGACTCACGACGGGACTGGGGTCATGCGAAGGATTATGTTGAGGCGATG 22390 Query 31367 TGGCTCATGCTTCAACAAGAACGTCCAGATGATTATGTCGTCGCAACAGGTAAATCACAT 31426 ||| ||||| ||||| || ||| | ||||||||| | |||| || |||||||| Sbjct 22389 TGGAAAATGCTACAACAGGACGATCCTCAGGATTATGTCATTTCAACCGGAGAATCACAT 22330 Query 31427 TCTGTACGGGAGTTCATAGAA 31447 ||||| ||||| ||| | ||| Sbjct 22329 TCTGTTCGGGAATTCGTTGAA 22309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587941986372200