Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq128062 140 5e-28 seq21107 129 9e-25 seq17817 129 9e-25 seq14450 116 6e-21 seq32426 105 1e-17 seq68991 104 4e-17 seq918 102 1e-16 seq21020 95.1 2e-14 >seq128062 Length=3476 Score = 140 bits (154), Expect = 5e-28 Identities = 189/258 (73%), Gaps = 4/258 (2%) Strand=Plus/Plus Query 227403 taatacaaaaacaaaattatattaaatttttaaagaaaaatgatctagaatataaagaaa 227462 ||||| |||| ||| ||| |||| ||||||| || ||| || | |||| ||||| Sbjct 1377 TAATAATAAAAGAAATTTAG-TTAAGATTTTAAAAAATAATAATATTTCTTATACAGAAA 1435 Query 227463 ttaaatataatcataatTTAGCTTTAGAATATGAATTTAT-CAAAACTGATATTAAAAAT 227521 ||||| | ||| || |||||||||||||||||||| ||| |||||| || ||||||||| Sbjct 1436 TTAAACACAATAATCCTTTAGCTTTAGAATATGAATATATACAAAAC-GAGATTAAAAAT 1494 Query 227522 ACATCATCAAATAATTTATCAAGAAAAATATGGATATTGTTATCAATAGATAATTTTAAA 227581 | | | ||||||||| | ||||| ||| || || ||| ||| |||||||||||| Sbjct 1495 TTAACTCCTAATAATTTAGTACAAAAAACATGAATTTTATTAACAACTGATAATTTTAAA 1554 Query 227582 GAATCTGTAATGTTAATTAACACCAAGGATTGTAAACATATTAGAAAATATTATATAACA 227641 ||| | |||||| | | || | | | |||| | |||||| ||||||||| ||| Sbjct 1555 GAAGCAGTAATGATGTTGAATAATTATAAAGCTAAAGAAGTTAGAAGATATTATAT-ACA 1613 Query 227642 ATAGAAAAGGTATTATAT 227659 | | ||| |||| ||| Sbjct 1614 ACAAGAAAAATATTCTAT 1631 Score = 132 bits (146), Expect = 8e-26 Identities = 147/192 (77%), Gaps = 3/192 (2%) Strand=Plus/Minus Query 18125 CATTACAGATTCTTTAAAATTATCTATTGATAACAATATCCATATTTTTCTTGATAAATT 18184 |||||| | ||||||||||||||| ||| ||| || || ||| ||||| | |||||| Sbjct 1566 CATTACTGCTTCTTTAAAATTATCAGTTGTTAATAAAATTCATGTTTTTTGTACTAAATT 1507 Query 18185 ATTTGATGATGTATTTTTAATATCAGTTTTG-ATAAATTCATATTCTAAAGCTAAattat 18243 ||| | | | ||||||||| || |||||| ||| |||||||||||||||||||| || Sbjct 1506 ATTAGGAGTTAAATTTTTAATCTC-GTTTTGTATATATTCATATTCTAAAGCTAAAGGAT 1448 Query 18244 gattatatttaatttctttatattctagatcatttttctttaaaaatttaatataatttt 18303 ||| | |||||||||| |||| | || ||| || ||||||| |||| ||| ||| Sbjct 1447 TATTGTGTTTAATTTCTGTATAAGAAATATTATTATTTTTTAAAATCTTAA-CTAAATTT 1389 Query 18304 gtttttgtatta 18315 |||| ||||| Sbjct 1388 CTTTTATTATTA 1377 Score = 91.5 bits (100), Expect = 2e-13 Identities = 207/303 (68%), Gaps = 15/303 (5%) Strand=Plus/Plus Query 243531 GATATTTGGTTACCTTTATTTGAAGAGAAAGATGTCTTGATCACTGATAATATATTAAAA 243590 ||||| ||||| || | | |||| | || || | || || ||| || |||| || | Sbjct 1258 GATATGTGGTTTCCACTTTCTGAAAAAAAGAATATTTTAATAACTAATGATATTATATAT 1317 Query 243591 TTTATTCATTATGGTATTAATATTTCAGGGTGCGGCGT-GCGGCAC--CCTGA--TTTTA 243645 |||||||||||||| | |||||||| || | || || ||||| ||||| Sbjct 1318 TTTATTCATTATGGAGAAGAGATTTCAGGA---GGTATAGCCATACTTCCTGAAATTTTA 1374 Query 243646 AACaa--ataaaacatcatttaaaacaaagtttaaataattataacattcaatatataga 243703 | || |||||| | ||||| | | |||||| ||| |||| ||| |||| ||| Sbjct 1375 ACTAATAATAAAAGAA-ATTTAGTTAAGATTTTAAAAAATAATAATATTTCTTATACAGA 1433 Query 243704 aataaaatataatgata--tcagaataaatgaatatgaatatgtaaagaatgatattaaa 243761 ||| ||| | ||| || | || | | |||||||||||| || | || || |||||| Sbjct 1434 AATTAAACACAATAATCCTTTAGCTTTA--GAATATGAATATATACAAAACGAGATTAAA 1491 Query 243762 aaaatATCACCTAATAATTTAGTTCAAAAATATTGGATATTGCTACCGATTAGAAATTTT 243821 || || | |||||||||||||| |||||| || || || || | | | |||||| Sbjct 1492 AATTTAACTCCTAATAATTTAGTACAAAAAACATGAATTTTATTAACAACTGATAATTTT 1551 Query 243822 AAA 243824 ||| Sbjct 1552 AAA 1554 Score = 91.5 bits (100), Expect = 2e-13 Identities = 207/303 (68%), Gaps = 15/303 (5%) Strand=Plus/Minus Query 1894 TTTAAAATTTCTAATCGGTAGCAATATCCAATATTTTTGAACTAAATTATTAGGTGATat 1953 ||||||||| | | | || || || || |||||| |||||||||||||| | || Sbjct 1554 TTTAAAATTATCAGTTGTTAATAAAATTCATGTTTTTTGTACTAAATTATTAGGAGTTAA 1495 Query 1954 ttttttaatatcattctttacatattcatattcatttattctga--tatcattatatttt 2011 |||||||| || || | || |||||||||||| | | || | || ||| | ||| Sbjct 1494 ATTTTTAATCTCGTTTTGTATATATTCATATTC--TAAAGCTAAAGGATTATTGTGTTTA 1437 Query 2012 atttctatatattgaatgttataattatttaaactttgttttaaatgatgttttat--tt 2069 |||||| |||| ||| |||| ||| |||||| | | ||||| | |||||| || Sbjct 1436 ATTTCTGTATAAGAAATATTATTATTTTTTAAAATCTTAACTAAAT-TTCTTTTATTATT 1378 Query 2070 GTTTAAAA--TCAGG--GTGCCGC-ACGCCGCACCCTGAAATATTAATACCATAATGAAT 2124 |||||| ||||| || || | || |||||||| | ||||||||||| Sbjct 1377 AGTTAAAATTTCAGGAAGTATGGCTATACC---TCCTGAAATCTCTTCTCCATAATGAAT 1321 Query 2125 AAATTTTAATATATTATCAGTGATCAAGACATCTTTCTCTTCAAATAAAGGTAACCAAAT 2184 ||| | || |||| || ||| || || | || || | |||| | | || ||||| || Sbjct 1320 AAAATATATAATATCATTAGTTATTAAAATATTCTTTTTTTCAGAAAGTGGAAACCACAT 1261 Query 2185 ATC 2187 ||| Sbjct 1260 ATC 1258 >seq21107 Length=15695 Score = 129 bits (142), Expect = 9e-25 Identities = 164/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||||||||| || ||||| || ||| | || || |||| | Sbjct 13488 TGCAAATCTTTGTGAAAACATTAACCGGTAAAACGATCACTTTGGAAGTGGAACCGTCGG 13547 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||||||||| || ||||| |||||||| ||||| || ||||||| Sbjct 13548 ATACGATCGAAAATGTAAAGGCGAAGATACAGGACAAAGAAGGGATTCCCCCGGATCAAC 13607 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||| || || || |||||||| || || | || | | |||||||||| Sbjct 13608 AGAGACTCATCTTCGCGGGGAAACAATTGGAAGACGGACGGACTCTTTCCGATTATAATA 13667 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | || ||||| |||||| ||||||| || | || | || ||||| Sbjct 13668 TTCAGAAAGAGTCGACTCTCCATTTGGTTCTTCGCCTCAGGGGAGG 13713 Score = 125 bits (138), Expect = 1e-23 Identities = 156/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | |||||| | || || ||||| ||||| | || || |||| | || Sbjct 14561 TGCAAATCTTTGTCAAAACACTCACCGGTAAAACCATTACATTGGAAGTTGAACCGAGCG 14620 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||||||||| ||||| ||| ||||| || ||||| |||||||| | Sbjct 14621 ATACCATCGAAAATGTAAAGGCCAAAATTCAAGACAAAGAGGGTATTCCCCCCGATCAGC 14680 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | ||||| || || |||||| | || ||| | || | | |||||||||| Sbjct 14681 AGCGATTGATTTTCGCCGGGAAACAACTCGAAGATGGACGTACACTGTCCGATTATAATA 14740 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| || |||||| |||| ||||| ||||| Sbjct 14741 TCCAAAAGGAGTCGACTCTCCACTTAGTCTTACG 14774 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| || ||| | || || |||| || Sbjct 13944 TGCAGATCTTCGTTAAGACTCTCACCGGCAAAACCATCACTTTGGAAGTGGAACCCTCCG 14003 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || || || || |||||| || ||||| || ||||||| Sbjct 14004 ATACCATTGAGAATGTTAAGGCCAAGATTCAGGATAAAGAGGGAATTCCCCCGGATCAAC 14063 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||| ||||| || || |||||||| || || | || | | ||||| |||| Sbjct 14064 AGAGACTTATTTTCGCGGGAAAACAATTGGAGGACGGACGGACTCTCAGCGATTACAATA 14123 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||| |||||| ||||||||||||| || | || ||||||| Sbjct 14124 TTCAGAAAGAGTCGACTCTCCATTTAGTATTGCGTCTCAGGGGAGGTA 14171 Score = 116 bits (128), Expect = 6e-21 Identities = 154/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || || | || || ||||| ||||| | || || || | | || Sbjct 13716 TGCAAATCTTCGTCAAGACTCTCACCGGCAAAACCATTACATTGGAAGTTGAGCCGAGCG 13775 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || ||||| ||| |||||| || ||||| |||||||| | Sbjct 13776 ATACCATTGAGAATGTTAAGGCCAAAATTCAAGATAAAGAGGGTATTCCCCCCGATCAGC 13835 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | ||||| || || |||||| | || ||| | || | | |||||||||| Sbjct 13836 AGCGATTGATTTTCGCCGGAAAACAACTCGAAGATGGACGTACACTGTCCGATTATAATA 13895 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||| || |||||| |||| ||||| ||||| Sbjct 13896 TTCAAAAGGAGTCGACTCTCCACTTAGTCTTACG 13929 Score = 87.8 bits (96), Expect = 3e-12 Identities = 164/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || | || || ||||| || || | || || |||| | Sbjct 14789 TGCAGATCTTCGTCAAGACTCTCACCGGTAAAACCATCACATTGGAGGTGGAACCCTCTG 14848 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || |||| || ||| ||||| ||| |||||| || ||||| || ||||| | Sbjct 14849 ATACCATCGAAAACGTGAAAGCGAAAATTCAAGATAAAGAGGGGATTCCTCCGGATCAGC 14908 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| || ||||||||||| || | || | | || ||||||| Sbjct 14909 AGCGTCTGATCTTTGCCGGAAAACAATTAGAGGACGGCCGTACTCTCTCGGACTATAATA 14968 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATTGA 146271 | ||||| ||||||||| | || | || || || | | |||||| | || | ||| | Sbjct 14969 TTCAAAAGGAATCGACTCTTCACCTCGTCTTGCGTCTGCGCGGAGGTTATTAGACATTTA 15028 Query 146272 A 146272 | Sbjct 15029 A 15029 >seq17817 Length=30685 Score = 129 bits (142), Expect = 9e-25 Identities = 142/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||||||||| ||||| || ||||| | || || |||| | | Sbjct 625 TGCAAATCTTTGTGAAAACATTAACGGGAAAGACCATTACATTAGAGGTCGAACCGAGTG 684 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| || | ||||||||| || ||||| |||||||| ||||| || ||||||| Sbjct 685 ATACGATAGAGAATGTAAAAGCGAAGATACAGGACAAAGAAGGGATTCCCCCGGATCAAC 744 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | |||||||||||||| || |||||||| || || | || | | |||||||||| Sbjct 745 AGAGACTCATTTTTGCGGGGAAACAATTGGAAGACGGACGGACTCTTTCCGATTATAATA 804 Query 146212 TACAAAAAG 146220 ||||||||| Sbjct 805 TACAAAAAG 813 >seq14450 Length=5806 Score = 116 bits (128), Expect = 6e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| | || |||||||| ||||| || || ||| | || || |||| | Sbjct 5467 TGCAAATTTTCGTTAAGACATTAACGGGAAAGACCATCACTTTGGAAGTGGAACCGTCTG 5408 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | ||||| || || ||||| |||||| || ||||| || ||||||| Sbjct 5407 ATACCATTGAGAATGTTAAGGCGAAGATACAGGATAAAGAGGGAATTCCCCCGGATCAAC 5348 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | ||||||||||| || || |||||||| || || | || | | |||||||||| Sbjct 5347 AGAGACTCATTTTCGCGGGGAAACAATTGGAAGACGGACGGACTCTGAGTGATTATAATA 5288 Query 146212 TACAAAAAG 146220 ||||||||| Sbjct 5287 TACAAAAAG 5279 >seq32426 Length=2656 Score = 105 bits (116), Expect = 1e-17 Identities = 168/241 (70%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | |||||| | | || ||||| || ||| | || || |||| | Sbjct 432 TGCAAATATTCGTGAAAACACTCATCGGCAAAACTATCACTTTGGAAGTGGAACCCTCAG 373 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| ||||| ||| |||||| || ||||| || ||||||| Sbjct 372 ACACCATTGAGAATGTCAAAGCCAAAATTCAAGATAAAGAGGGGATTCCTCCGGATCAAC 313 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | || || ||||| || |||||||| || || | || | | || || |||| Sbjct 312 AGCGTCTGATCTTTGCCGGAAAACAATTGGAGGACGGCCGTACTCTCTCGGACTACAATA 253 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTAAATAAATATTGA 146271 | ||||| ||||||||| | || | || || || | | |||||| | || ||||| | Sbjct 252 TTCAAAAGGAATCGACTCTTCACCTCGTCTTGCGTCTGCGCGGAGGTTATTAGATATTTA 193 Query 146272 A 146272 | Sbjct 192 A 192 >seq68991 Length=328 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||||||| | ||||| | || || ||||| ||||| | || || |||| || Sbjct 170 TGCAAATATTCGTGAAAACTCTCACCGGTAAAACCATTACATTGGAAGTCGAACCCTCCG 111 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| ||||||| ||| |||||||| |||||||| ||||| || ||||||| Sbjct 110 ATACTATCGAAAATGTCAAAGCGAAAATACAGGACAAAGAAGGGATTCCCCCGGATCAAC 51 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGAT 146186 | | || || ||||| || |||||||| || ||| Sbjct 50 AGCGTCTGATCTTTGCCGGAAAACAATTGGAAGAT 16 >seq918 Length=8345 Score = 102 bits (112), Expect = 1e-16 Identities = 101/128 (79%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 12517 AAGAAAATCTAAAATATTATTAGTAATCAAAATATCTTTCTTATCAAATAACGGAATCCA 12576 || ||||| ||| |||| ||||||||||||||||| ||| | ||||| | | || ||| Sbjct 1618 AATAAAATTTAATATATCATTAGTAATCAAAATATTTTTTTGTTCAAAAAGTGAAAACCA 1677 Query 12577 TATATCATAAAACCAATTTCCCAAATCTAAAAT-ATAATTATTACTATTGATAAATTCAA 12635 |||||| | ||||||| | || |||| ||| | ||||||||| ||| ||| |||||| Sbjct 1678 TATATCTTTAAACCAAGTACCTAAAT-TAATTTGATAATTATTTTCATTTATATATTCAA 1736 Query 12636 ATATATTT 12643 |||||||| Sbjct 1737 ATATATTT 1744 Score = 102 bits (112), Expect = 1e-16 Identities = 101/128 (79%), Gaps = 2/128 (2%) Strand=Plus/Minus Query 233075 AAATATATTTGAATTTATCAATAGTAATAATTAT-ATTTTAGATTTGGGAAATTGGTTTT 233133 |||||||||||||| ||| ||| ||||||||| | ||| |||| || | ||||||| Sbjct 1744 AAATATATTTGAATATATAAATGAAAATAATTATCAAATTA-ATTTAGGTACTTGGTTTA 1686 Query 233134 ATGATATATGGATTCCGTTATTTGATAAGAAAGATATTTTGATTACTAATAATATTTTAG 233193 | ||||||||| || | | ||||| | ||| ||||||||||||||||| |||| ||| Sbjct 1685 AAGATATATGGTTTTCACTTTTTGAACAAAAAAATATTTTGATTACTAATGATATATTAA 1626 Query 233194 ATTTTCTT 233201 ||||| || Sbjct 1625 ATTTTATT 1618 Score = 96.9 bits (106), Expect = 5e-15 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Plus Query 2119 ATGAATAAATTTTAATATATTATCAGTGATCAAGACATCTTTCTCTTCAAATAAAGGTAA 2178 || |||||| |||||||||| || ||| ||||| | || ||| | |||||| | | || Sbjct 1615 ATAAATAAAATTTAATATATCATTAGTAATCAAAATATTTTTTTGTTCAAAAAGTGAAAA 1674 Query 2179 CCAAATATCATAAAACCATGTATCTAATTTTAAATCATAATGCTT---ATTTATATATTC 2235 ||| ||||| | |||||| ||| |||| || | | ||||| || |||||||||||| Sbjct 1675 CCATATATCTTTAAACCAAGTACCTAAATTAATTTGATAATTATTTTCATTTATATATTC 1734 Query 2236 AAATATAGTTAATAATTTT 2254 ||||||| || |||| || Sbjct 1735 AAATATATTTTTTAATGTT 1753 Score = 96.9 bits (106), Expect = 5e-15 Identities = 105/139 (76%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 243464 AAAATTATTAACTATATTTGAATATATAAAT---AAGCATTATGATTTAAAATTAGATAC 243520 || |||| || ||||||||||||||||||| || ||||| | | || |||| ||| Sbjct 1753 AACATTAAAAAATATATTTGAATATATAAATGAAAATAATTATCAAATTAATTTAGGTAC 1694 Query 243521 ATGGTTTTATGATATTTGGTTACCTTTATTTGAAGAGAAAGATGTCTTGATCACTGATAA 243580 |||||| | ||||| ||||| | | |||||| | ||| || | ||||| ||| || | Sbjct 1693 TTGGTTTAAAGATATATGGTTTTCACTTTTTGAACAAAAAAATATTTTGATTACTAATGA 1634 Query 243581 TATATTAAAATTTATTCAT 243599 ||||||||| |||||| || Sbjct 1633 TATATTAAATTTTATTTAT 1615 Score = 95.1 bits (104), Expect = 2e-14 Identities = 72/85 (85%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 16906 ATAAAATTTAAAATATTATTAGTAATCAATACATCTTTTTGTTCAAATAATGGTAGCCAT 16965 ||||||||||| |||| |||||||||||| | || |||||||||||| | || | |||| Sbjct 1619 ATAAAATTTAATATATCATTAGTAATCAAAATATTTTTTTGTTCAAAAAGTGAAAACCAT 1678 Query 16966 ATATCTTCAAACCAATTTCCTAAAT 16990 ||||||| ||||||| | ||||||| Sbjct 1679 ATATCTTTAAACCAAGTACCTAAAT 1703 Score = 89.7 bits (98), Expect = 8e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 228731 TAGGAAATTGGTTTGAAGATATATGGCTACCATTATTTGAACAAAAAGATGTATTGATTA 228790 |||| | ||||||| ||||||||||| | || | |||||||||||| || | ||||||| Sbjct 1700 TAGGTACTTGGTTTAAAGATATATGGTTTTCACTTTTTGAACAAAAAAATATTTTGATTA 1641 Query 228791 CTAATAATATTTTAAATTTTAT 228812 ||||| |||| ||||||||||| Sbjct 1640 CTAATGATATATTAAATTTTAT 1619 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 15434 ATGAATTTTAATATATTATTAGTAATTAATACATCTTGTTTATAAAATAATGGTATCCAT 15493 || || |||||||||| ||||||||| || | || || || | ||| | || | |||| Sbjct 1619 ATAAAATTTAATATATCATTAGTAATCAAAATATTTTTTTGTTCAAAAAGTGAAAACCAT 1678 Query 15494 ATTTCTTCAAACCATTGTCCTAAATCTAATTCATAATTATTTTTATTAATAAACTCAAAT 15553 || |||| |||||| ||||||| | || ||||||||||| ||| ||| | |||||| Sbjct 1679 ATATCTTTAAACCAAGTACCTAAATTAATTTGATAATTATTTTCATTTATATATTCAAAT 1738 Query 15554 ATGTTT 15559 || ||| Sbjct 1739 ATATTT 1744 Score = 87.8 bits (96), Expect = 3e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 230159 AAACATATTTGAGTTTATTAATAAAAATAATTATGAATTAGATTTAGGACAATGGTTTGA 230218 ||| |||||||| | ||| ||| ||||||||||| || | ||||||| |||||| | Sbjct 1744 AAATATATTTGAATATATAAATGAAAATAATTATCAAATTAATTTAGGTACTTGGTTTAA 1685 Query 230219 AGAAATATGGATACCATTATTTTATAAACAAGATGTATTAATTACTAATAATATATTAAA 230278 ||| |||||| | || | ||| | || || || | || ||||||||| |||||||||| Sbjct 1684 AGATATATGGTTTTCACTTTTTGAACAAAAAAATATTTTGATTACTAATGATATATTAAA 1625 Query 230279 ATTCAT 230284 || || Sbjct 1624 TTTTAT 1619 >seq21020 Length=2817 Score = 95.1 bits (104), Expect = 2e-14 Identities = 138/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 146046 AAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGATACTATTCAAAAT 146105 ||||||||||| || ||||| || ||| | || || | || ||||| || |||| Sbjct 2816 AAAACATTAACCGGTAAAACGATCACTTTGGAAGTTGTACCGTCGGATACGATCGGAAAT 2757 Query 146106 GTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTT 146165 ||||| || ||||| |||||||| ||||| || |||||||| | ||||| || Sbjct 2756 GTAAAGGCGAAGATACAGGACAAAGAAGGGATTCCCCCGGATCAACAGAAACTCACCTTC 2697 Query 146166 GCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCG 146225 | || ||||||| || | | | || | | ||||||||||| || ||| | ||| Sbjct 2696 GATGGGGAACAATTGGAGAACAGATGGACTCTTTCCGATTATAATATTCAGAAAAAGTCG 2637 Query 146226 ACTATCCATTTAGTA 146240 ||| ||||||||||| Sbjct 2636 ACTCTCCATTTAGTA 2622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784786196441080