Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq9998 84.2 3e-11 >seq9998 Length=203 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 161309 CGTATCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAA 161368 ||| ||||||| |||||||| ||| | ||||| || || ||||| | ||| || ||| Sbjct 30 CGTTTCTACCAAGCATCCACATCTGAACTTTATGGTTTAGTTCAAGAAATACCGCAAAAA 89 Query 161369 GAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGG 161428 |||||||| || || || ||||| || |||| ||||| ||| | |||| || ||| Sbjct 90 GAAACAACGCCGTTTTATCCACGTAGCCCCTATGCTGTAGCAAAAATGTATGCCTACTGG 149 Query 161429 ATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATT 161479 || | ||||| | ||| |||||| || | ||| ||| |||||| Sbjct 150 ATCACGATTAACTATCGCGAGGCTTATGGCATCTATGCCTGTAACGGTATT 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728648126470120