Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypochthonius_20rufulus_20[genbank_20GCA_5F000988845.1_202015-05-06] 140,449 sequences; 172,365,132 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq21474 100 2e-16 >seq21474 Length=6928 Score = 100 bits (110), Expect = 2e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 ||||||||| | | ||||| ||||| ||||| |||||||||||||| || || ||||| Sbjct 5143 GAAGTTCAAGTTACTGAAGCGCGATGCTTTTACGGGTTTCAAATTGCAATTGAGAATATA 5202 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACAT 44013 |||||||||||||| ||||| |||| || ||||| || Sbjct 5203 CATTCGGAAATGTATAGTCTATTGATTGACACGTATAT 5240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396775665746245