Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq4656 138 2e-27 >seq4656 Length=6745 Score = 138 bits (152), Expect = 2e-27 Identities = 254/370 (69%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 281553 TCTTTGGGATTATAACTGGGAATGTTAGTAGACCAACCGGTTCCAATACCACTTGAACCA 281612 ||| ||||||| || | || || ||||| ||| || |||||||||||| | |||| Sbjct 5394 TCTCTGGGATTGTAGTTAGGTATTTTAGTCATCCACCCAGTTCCAATACCATCAGCACCA 5453 Query 281613 TTTACCAAAATACTCGGGATAATAGGTACATAACATTCTGGTTCAATTTTATCACCATCA 281672 ||||||| || |||| ||||| |||| ||| || | ||||||||||| | | |||| Sbjct 5454 TTTACCAGAACCATCGGAATAATGGGTATATACCAAACGGGTTCAATTTTCTGATTATCA 5513 Query 281673 TCATACAAATACTTCAGAAGGTTATCATCTGTATCGACGAAA-ACCTGTCGCGTCTTAGG 281731 ||||| || | |||||| ||||| || | || |||| | | || ||| || Sbjct 5514 TCATATTCATGTGTTAGAAGGGCGTCATC-GTTTGGATGAAATATCAAACGTGTCAGTGG 5572 Query 281732 GTTCAGTTTCGTGAAGATATACCTTGCACTCGCGTGGTCTTTACCACCCTGCAGCCTCGA 281791 || ||| || || ||||| || ||||| || ||| || || ||| | | | Sbjct 5573 AGACATTTTTGTAAAAATATATCTCGCACTTGCAGAGTCCTTTCCGCCCATTAAACGGGT 5632 Query 281792 CCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTATTGCTCCCGACGTAATCCTGAGC 281851 ||||| ||||| || ||| | ||||| |||||||| ||||| ||| ||||| Sbjct 5633 ACCAAATTGACCACGTGGTTCCAATAAATTAATATTATTGCTTCCGACAAAATTTTGAGC 5692 Query 281852 CAGGTTGACGATTGTCCCCTGAAGCGATACCTCACCGTGGTGATAGGCGCTGTGTTCGGC 281911 || || ||||| ||| | || ||||| |||||||| |||||||| ||||| || Sbjct 5693 AAGATTCACGATGGTCGCACAGAGAGATACTTCACCGTGATGATAGGCCGAATGTTCAGC 5752 Query 281912 AACATAACCA 281921 || ||||| Sbjct 5753 TACTGAACCA 5762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057608555630480