Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq173 210 2e-49
>seq173
Length=58411
Score = 210 bits (232), Expect = 2e-49
Identities = 368/524 (70%), Gaps = 10/524 (2%)
Strand=Plus/Plus
Query 101746 TAGATTAGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGG 101805
|||||| || |||||||| ||||| ||||||| | || |||||||||||| ||||| ||
Sbjct 29198 TAGATTGGTAACATGAGCTATCATATAAGTTAACAAAGCATAGCTAGCAATATTAAAAGG 29257
Query 101806 CACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACA 101865
||||| | ||||||||||||||||| ||||| | |||||||| | | ||||
Sbjct 29258 AACTCCAAGTCCCATATCAGCTGATCTCTGATATAACTGACAGGATAATTCACCATTGGC 29317
Query 101866 GACATAAAATTG-ACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924
|||||||| || ||| || | ||| |||||||| | |||||| ||| | || | |
Sbjct 29318 CACATAAAACTGCACTAAACA-ATGGCAAGGCGGTAGAGCCATTTCAGGGAGATCCGTAG 29376
Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCA 101984
|||||| |||||||| | ||| ||||||||||| | || ||||| || |||| || |
Sbjct 29377 GATTCCATGCACACATAATCATTCTTCTATCTGTTGAATTAGTTTTGATGGTATTGATTA 29436
Query 101985 ACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAA-TCGCGCCCAACACCTTTATATTCT 102043
|||| ||||| |||| |||| | ||||| ||| | | || || |||||
Sbjct 29437 CCTGTGCCAATTGATCAATGCCTTTATTTGTATAATTCGAATGC-ATTCCCTTGTATTCA 29495
Query 102044 GCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCA 102103
|| || | || | ||| || || ||||| | ||||| | ||| || ||||| | |||
Sbjct 29496 GCACCATAGTGACGCCATTGGAAACCATATATTGGTCCCAAATCGCCCTCATCACGATCA 29555
Query 102104 TAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCAC-GCC 102162
| |||| | ||||| ||| | | | ||| |||||||||||||| ||
Sbjct 29556 GTTAGTCCAATTGAATCTAGGAATTCACGACTACTATTTGCATCCCAAATGTGAACATTT 29615
Query 102163 AGCT-GCTGATAGCTC-TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCA 102220
|| |||| || || ||| || || ||||| || ||||||||||||||||||
Sbjct 29616 TTCTCGCTG--AGTTCAAATGC-GTTTGTGCTACCTCTTATGAACCACAACAGTTCTTCA 29672
Query 102221 ACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA 102264
|| ||| | ||||| || || | || || || | ||||||||
Sbjct 29673 ACTACAGCCCTCCAGAACACCCGTTTTGTTGTAAGGAGTGGAAA 29716
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361181213901896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |