Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq173 241 9e-59
>seq173
Length=58411
Score = 241 bits (266), Expect = 9e-59
Identities = 390/543 (72%), Gaps = 26/543 (5%)
Strand=Plus/Plus
Query 97117 GTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCT 97176
|| ||||| || |||||| ||||||| | || |||||||||||| |||||||| || ||
Sbjct 29205 GTAACATGAGCTATCATATAAGTTAACAAAGCATAGCTAGCAATATTAAAAGGAACTCCA 29264
Query 97177 AGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACATAA 97236
|||||||||||||||||||| ||||||||||||||||| | | |||| |||||||
Sbjct 29265 AGTCCCATATCAGCTGATCTCTGATATAACTGACAGGATAATTCACCATTGGCCACATAA 29324
Query 97237 AACTG-ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATC--TAAGACATTC 97293
||||| ||| || | ||| || || || | ||||||| || | ||| || | ||||
Sbjct 29325 AACTGCACTAAACA-ATGGCAAGGCGGTAGAGCCATTTCAGGGAGATCCGTAGG--ATTC 29381
Query 97294 CAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGC 97353
|| |||||||| | |||||||||||| |||| || || | |||||||| |||| |||
Sbjct 29382 CATGCACACATAATCATTCTTCTATCTGTTGAATTAGTTTTGATGGTATTGATTACCTGT 29441
Query 97354 TTTAATTGATCAACGCCTTCTCCACCATAATT---GTGCTTAAGACCTTGATATTCTGCT 97410
|||||||||| ||||| |||||| ||| | ||||| ||||| ||
Sbjct 29442 GCCAATTGATCAATGCCTTTATTTGTATAATTCGAATGC--ATTCCCTTG-TATTCAGCA 29498
Query 97411 CCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAG 97470
||| | || | ||||||||| ||||| | ||||| | || || || || | ||||
Sbjct 29499 CCATAGTGACGCCATTGGAAACCATATATTGGTCCCAAATCGCCCTCATCACGATCAGTT 29558
Query 97471 AAACCAAGCTTATCTA--AAT--AGGACCTAGATCCATTTGCATCCCAAATGTGCACACC 97526
| |||| ||||| ||| | || ||| | |||||||||||||||||| |||
Sbjct 29559 AGTCCAATTGAATCTAGGAATTCACGA-CTA---CTATTTGCATCCCAAATGTGAACA-- 29612
Query 97527 AGATGCT-GC-AAGCTC-TTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTC 97583
| || || || || ||| || || ||||| || |||||||||| ||||||
Sbjct 29613 TTTTTCTCGCTGAGTTCAAATGC-GTTTGTGCTACCTCTTATGAACCACAACAGTTCTTC 29671
Query 97584 CACAACACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAATCCTTTTCTAAGCT 97643
|| ||| | ||||| || || | || ||||| | ||| |||||| || || |||| |
Sbjct 29672 AACTACAGCCCTCCAGAACACCCGTTTTGTTGTAAGGAGTGGAAAAGTCTCTTTTAAGTT 29731
Query 97644 GTA 97646
|||
Sbjct 29732 GTA 29734
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346716816668720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |