Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_003038.1
Length=212482
Score E
Sequences producing significant alignments: (Bits) Value
seq173 122 1e-22
>seq173
Length=58411
Score = 122 bits (134), Expect = 1e-22
Identities = 156/215 (73%), Gaps = 15/215 (7%)
Strand=Plus/Minus
Query 104530 GATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTAAAATGGCACTTCCT 104589
|||||||||||||| | | || ||||| || | |||| || ||||||| || ||
Sbjct 29407 GATAGAAGAATGATTATGTGTGCATGGAATCCTACGGATCTCCCTGAAATGGCTCTACCG 29348
Query 104590 CCTTGTCATTGTATAGCACATTTTGATGTAAGTTCAAAAATAAATGGTAAAAGAGAATTG 104649
||||| |||||| ||| || ||| |||| | ||| |||| |||||
Sbjct 29347 CCTTGCCATTGTTTAGTGCAGTTTTATGT--GGCCAA-------TGGT------GAATTA 29303
Query 104650 TCTTGTCATTTATTTCAAAGATCTGCAGATATGGGGTTGGGAGTTCCTTTTAACATAGCA 104709
|| ||||| |||| ||| ||||| || |||||||| | |||||||||||||| || ||
Sbjct 29302 TCCTGTCAGTTATATCAGAGATCAGCTGATATGGGACTTGGAGTTCCTTTTAATATTGCT 29243
Query 104710 AGTTATGCATTATTAACACATATAATAGCTCATGT 104744
|| ||||| || ||||| |||| |||||||||||
Sbjct 29242 AGCTATGCTTTGTTAACTTATATGATAGCTCATGT 29208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 679679320878720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |