Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq2259 87.8 1e-12
>seq2259
Length=79244
Score = 87.8 bits (96), Expect = 1e-12
Identities = 149/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 18110 TCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACA 18169
||| ||||||| ||| || || || || ||||| || || ||||||| | || ||
Sbjct 78073 TCTGAGTACCAAGTGCAGGGTGGACTCCTTTTGGATATTATAGTCGGAGAGGGTGCGACC 78132
Query 18170 ATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTT 18229
||| |||| |||||| || ||| |||| | | |||||| || ||| | ||||| ||
Sbjct 78133 ATCCTCCAGTTGTTTACCAGCAAAGATCAAACGTTGTTGGTCTGGGGGGATACCTTCTTT 78192
Query 18230 ATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGAT 18289
|| ||||| ||| || | | ||| ||||| || ||| |||| ||||||
Sbjct 78193 GTCCTGAATTTTCGCCTTTACATTTTCAATGGTGTCGGATGGTTCGACCTCAAGGGTGAT 78252
Query 18290 GCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
| | || || || | ||||| || |||||||||||
Sbjct 78253 GGTCTTACCAGTGAGAGTTTTCACGAAAATTTGCAT 78288
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379270508738520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |