Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2028 84.2 2e-11 >seq2028 Length=154558 Score = 84.2 bits (92), Expect = 2e-11 Identities = 108/147 (73%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCA--TTTGCGGCCATATTCTG 22805 |||| ||||| || ||||||||| | | ||||| | | | ||||| || || ||||| Sbjct 60211 TGGCTTTTGCTGCCGTTGAAGGCAT--TTTTTTCAGTGGTAGCTTTGCAGCGATTTTCTG 60154 Query 22806 GCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGA 22865 | | ||||||||| || ||||| || || | ||||| || || ||||| | | || Sbjct 60153 GTTAAAGAAACGTGGTCTTATGCCCGGTTTAACATTTTCAAATGAATTGATATCCAGAGA 60094 Query 22866 CGAAGGTCTACACTGTGACTTTGCTTG 22892 ||||||||||| ||||| ||||| || Sbjct 60093 TGAAGGTCTACATTGTGATTTTGCATG 60067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356164585974088