Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq6696 104 3e-17 >seq6696 Length=61718 Score = 104 bits (114), Expect = 3e-17 Identities = 132/179 (74%), Gaps = 6/179 (3%) Strand=Plus/Plus Query 164519 AAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATTG 164578 |||| || |||||| |||||||||||||| |||||||| |||||||| || |||| Sbjct 2836 AAGGTATATTATTATATGGACCTCCTGGTACTGGTAAAACTTTAATGGCAAGACAAATTG 2895 Query 164579 CTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGTCCTGAATTATTGAACA 164635 || | |||||| | || || ||||| || ||||||||| || | ||| ||| Sbjct 2896 -GAAAAATGTTAAATGCCAGAGAACC--AAAAATCGTGAATGGTCCTCAAATTTTGGACA 2952 Query 164636 AATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAGAA 164694 | ||||| ||||| || ||||| || ||||||| ||||| || || ||||||||| Sbjct 2953 AGTATGTTGGTGAATCGGAAGCAAACGTTAGAAGACTGTTTGCCGAAGCCGAAGAAGAA 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595753600233600