Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq2028 379 2e-100
>seq2028
Length=154558
Score = 379 bits (420), Expect = 2e-100
Identities = 568/804 (71%), Gaps = 2/804 (0%)
Strand=Plus/Plus
Query 92918 AATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977
|| || | |||||||||||||||||| |||||| ||||||| | ||||||||||| |
Sbjct 59893 AACAAACGATCAGCTACAAATTCTATATACTGACACATCAATTTGCAATTCATTCCAATC 59952
Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037
|||| || || | ||| || | |||||| |||| || ||| ||| || ||| |||
Sbjct 59953 AGACTGACTGGCAAAGCCTCAGACAAGAACTCTTGTTCTATTGTAACTGCATCTG-CAAT 60011
Query 93038 ATTTCTA-TTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACATTAAGCACGC 93096
| | || ||||||| | || |||||| || | || | | | |||||| ||
Sbjct 60012 AATACTGGTTACTCTTTCTTGTGATGGTTTCTGATGCAGATGTGAGAATAGTAAGCATGC 60071
Query 93097 AAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGG 93156
||| || ||||| |||||| |||| |||||||| ||||| ||||||||||| ||
Sbjct 60072 AAAATCACAATGTAGACCTTCATCTCTGGATATCAATTCATTTGAAAATGTTAAACCGGG 60131
Query 93157 TAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACC 93216
| || || |||||||| | ||| || || | ||||| |||||| ||||| || ||
Sbjct 60132 CATAAGACCACGTTTCTTTAACCAGAAAATCGCTGCAAAGCTACCACTGAAAAAAATGCC 60191
Query 93217 TTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCA 93276
||| ||||| ||||| ||||| | | |||| | || | | || ||| |||||
Sbjct 60192 TTCAACGGCAGCAAAAGCCACCAATCTTTCGCCGAACGAGGATGTTTTCGAGCTAATCCA 60251
Query 93277 TTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAG 93336
|||| |||||||| ||||| ||||||| ||| || | ||||| ||||||||||| |
Sbjct 60252 CTTTAGGGCCCAATCAGCTTTCTTCTTAACACACGGCATGGTTTCAATAGCGTTAAACAA 60311
Query 93337 GTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGA 93396
| | ||| || | | ||| | || || || || || | |||||||||||
Sbjct 60312 GAACTCTTTTTCATTGGGATCGCTGATATACGTTTCAATAAGTTTGCTGTACATTTCAGA 60371
Query 93397 ATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCAC 93456
||||| ||| || |||||||| |||||||| || ||||| | |||||| || | || ||
Sbjct 60372 ATGGATATTTTCAATTGCAATCTGGAATCCATAAAAACAACGAGCTTCAGTCACTTGAAC 60431
Query 93457 TTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaa 93516
||||||| || | || || ||||| ||||| || |||||||| || || ||||||||
Sbjct 60432 TTCTTGACTGAAACGTTCCACAAGATTCTCATTTACAATACCATCTGAGGCAGCAAAAAA 60491
Query 93517 aGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAG 93576
||| || | ||| || |||||| || ||| ||| || || ||||| | |||
Sbjct 60492 AGCTAACACGTGCGAAATGAAATGTCGTTCTTCAGATTTCAGTTTCTCCCAGTGTCGTAG 60551
Query 93577 ATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACAT 93636
||| | | || || ||||| ||| ||||||||| || ||||| |||| ||||| |
Sbjct 60552 ATCATGGGTGAGGTCCACTTCCTCGGTAGTCCAAAAGGAAGCTTCAGCTTCCTTGTATTT 60611
Query 93637 ATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAG 93696
| ||| || ||| | ||| |||||| |||| ||||| | |||||| ||||| ||
Sbjct 60612 CTGCCAAATATCTGGGAATTCAATTGGGAATAAAACAAATCTTCGAGGGTTTTCTTTCAG 60671
Query 93697 TAACGGCTCTAGTTGTGGGTCAAA 93720
||| || || | || || |||||
Sbjct 60672 TAAAGGTTCCAACTGAGGATCAAA 60695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556750151759040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |