Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq27 86.0 2e-13 >seq27 Length=48532 Score = 86.0 bits (94), Expect = 2e-13 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 3344 GAGTCTTTCCAACAATCACTCGATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGG 3403 |||| ||||| | | ||||| ||| || || |||||||||||||| || || ||| | Sbjct 41832 GAGTTTTTCCTAAAGTCACTAAATGCACCTTCCACAAATACGGTCCATCAGGTTCCGTAC 41773 Query 3404 AAAACTACGAGGGACTCTGCATCCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTT 3463 | || | || ||||| ||| | || || |||| | || || || || |||||| | | Sbjct 41772 AGAAGTTTGACGGACTATGCGTACTGCCACTGAACATTGTTAATGAAAAAATCTACGTGT 41713 Query 3464 TCCTCTGGTTCTGGTTC 3480 |||| |||||||||||| Sbjct 41712 TCCTTTGGTTCTGGTTC 41696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12477830196000