Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq820 86.0 8e-12
>seq820
Length=22770
Score = 86.0 bits (94), Expect = 8e-12
Identities = 232/351 (66%), Gaps = 3/351 (1%)
Strand=Plus/Minus
Query 116236 AAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTA 116295
|||| |||||| | | |||||||| | || | || || || | ||||||| ||||
Sbjct 21574 AAAAAAAATACCTAT-CAAGACCTTGAATTCCTATACCGATAGGTCTATGTCTCTTATTG 21516
Query 116296 GACTTTCGAGCGGTCTCCACG-GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTT 116354
|| ||| || ||| | || ||| | || ||||||||| | |||| | ||| |
Sbjct 21515 GAATTTTCTGCT-TCTGGTAGAGGGTAATAGTTTATATCGATAATCTTATTCAAGTTTCT 21457
Query 116355 GGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATT 116414
|| || | || ||||| | | || ||||| |||||||||| | ||| ||||
Sbjct 21456 AGTCACTATTTTAGTGATATTTTTGAGTTTTTCAAAATCAAAACTCTTTCTATCTGCATT 21397
Query 116415 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 116474
||| || | | | ||||| ||||||||||| |||| | || || ||
Sbjct 21396 AACAAACATGTTCACAGGTATTGAAGCCAGATTACAGACAGCAATTTCGTCGGGCGACGT 21337
Query 116475 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 116534
||| |||| ||||| | ||| | || | || || |||||||||||||||||
Sbjct 21336 GTATTCTACGATTTCAGAACAAAGGTTACTGCCTTTTATCACTCCCAAGTTCTTTTGATT 21277
Query 116535 TGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTC 116585
|| ||| | || || || || ||||| |||||||| || || || || ||
Sbjct 21276 AGATTTTCTATTGCAAGCGTCTTTGTAAAGCATATAAGGAGTACCAGTTTC 21226
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613385296119360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |