Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq4764 280 1e-69
seq1422 239 3e-57
seq1585 125 5e-23
seq4867 105 5e-17
seq340 104 2e-16
seq1278 102 6e-16
seq970 102 6e-16
seq820 100 2e-15
seq97 91.5 1e-12
seq1579 86.0 5e-11
>seq4764
Length=58292
Score = 280 bits (310), Expect = 1e-69
Identities = 632/944 (67%), Gaps = 18/944 (2%)
Strand=Plus/Minus
Query 517214 TTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGA 517273
|| ||||||||||| || || |||||| || || || ||| ||| || || || | |
Sbjct 54870 TTGGTAATAGTAATTTTATTTTCTTTGTTGGTCGACTTTTCAATGGCGGTTACGTTCAAA 54811
Query 517274 ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGT 517333
||||| || || || | || || || ||||| |||||||| || || | |||| ||
Sbjct 54810 ATACCGTTTGCGTCGATGTCGAAAGTTACTTCGATTTGAGGCACACCGCGAGGAGCTGGC 54751
Query 517334 GGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCA 517393
||||| || ||| | ||| | |||||| ||| || || || | ||||||
Sbjct 54750 GGGATTCCAGTCAATTCGAATTTACCCAGAAGATTGTTGTCACGGGTCATGGCACGTTCA 54691
Query 517394 CCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTG 517453
|| ||| | | ||| ||| || ||| ||||||||| || || || |||||| |
Sbjct 54690 CCTTCGTATACTTGAATAAGTACCCCAGGTTGATTATCAGAGTAGGTAGTAAATGTTTGA 54631
Query 517454 GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCT 517513
| || ||| ||||| || |||||||| | ||||| ||||| | |||||| ||
Sbjct 54630 GTTTGCTTAGTGGGAATAGTAGTGTTTCTCTTAATAAGGGCTGTCATCACACCACCAGCA 54571
Query 517514 GTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCA 517573
||||| | ||| | ||| | ||||| || |||| || | | || || || |||
Sbjct 54570 GTTTCAATACCCAAAGACAATGGAGTTACGTCAAGAAGAAGTAAATCTT---GTACTTCC 54514
Query 517574 TCAGTTTGA---CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCA 517630
|||| || | || | ||||| || || | |||||||| || |||||||| |||
Sbjct 54513 TCAGATTTATCGCCGTGTAATATAGCGGCCTGTACTGCAGCACCGTAGGCAACAGCCTCA 54454
Query 517631 TCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTT 517690
|| ||||| | || || || | || ||| ||||| || |||| | || |||| |
Sbjct 54453 TCGGGATTGATAGATTTGTTCAATTCTTTTCCATTAAAGAAATCTTGTAGTAGTTTTTGA 54394
Query 517691 ACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCC 517750
|| || |||||||||| |||||| ||||| || ||||| || || || || | ||| |||
Sbjct 54393 ACTTTTGGAATACGAGTTGATCCACCAACCAAAACAATGTCGTGAACTTGGGCTTTGTCC 54334
Query 517751 AGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAA 517810
| ||| | ||| | | ||||| |||||||| | | | || | || |
Sbjct 54333 ATTTTAGCATCGCGAATGGCCTTTTCTACGGGTTCCATGGTGGAACGGAAGAGATCGGCG 54274
Query 517811 CAAAGTTCTTCGAATTTAGCTCTAGTAA---GAGTGACATTATAA-TCAATTCCTTCGAA 517866
| ||||||||| ||| | ||||| |||| || || |||||||| || ||
Sbjct 54273 TTCAATTCTTCGAAACGAGCACGAGTAATGGAAGTG----TAGAAGTCAATTCCCTCAAA 54218
Query 517867 CAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTC 517926
|| |||||| | ||||| | | |||||| || ||||| || | | ||| || | |||
Sbjct 54217 CAGAGAATCGATCTCAATACTGGCTTGAGTTGATGAAGAAAGAGTTCTTTTCGCTCTTTC 54158
Query 517927 ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATT--GATTCAAATCTGTTTTATAT 517984
||| || || || | || | ||| ||| | || ||| | ||| |||| | || |||
Sbjct 54157 ACAAGCGGTTCTCAATCGCCTTAAAGCTCT--CTTATTAGAAGTCAGATCTTTCTTGTAT 54100
Query 517985 TTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCCC 518044
|| | ||||| |||| ||| | | || | | || || |||||||| ||||||
Sbjct 54099 TTACGTTTGAATTCTTGGACAAAGTGATTAACCATTCTGTTGTCGAAATCTTCGCCTCCC 54040
Query 518045 AATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGA 518104
|| | ||| | || | |||| | |||||| ||| | |||||||||| | ||| |
Sbjct 54039 AAGTGAGTGTCACCAGCGGTAGATTTTACTTCGAAGATACCATCTTCAATGGTCAAGATG 53980
Query 518105 GTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATT 518148
| |||||| ||| ||||| |||| |||||| || | ||| ||
Sbjct 53979 GAGACATCAAAGGTACCACCGCCCAAATCAAAGATCAATACGTT 53936
Score = 134 bits (148), Expect = 1e-25
Identities = 145/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
|| || || ||||||||||||| ||||| ||||| |||||||| || ||||| | |||
Sbjct 53733 TTCTTGTCCAGACCATACGCAATGGCAGCTGCAGTAGGTTCATTGATGATTCTAAGAACT 53674
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
| ||| ||||||||| |||| | ||| || || || || | || ||||||||||||||
Sbjct 53673 TGAAGTCCAGCAATTGTTCCAGAATCCTTGGTTGCCTGACGCTGAGAATCGTTAAAATAG 53614
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGT 518344
|| || ||||||||||| |||| || || | || || | ||| || || ||||
Sbjct 53613 GCGGGTACAGTAATAACTGCATTGGTCACAGCCTTGCCCAAATAGGCTTCAGCGGTTTCC 53554
Query 518345 TTCATTTTACTT 518356
||||||||| ||
Sbjct 53553 TTCATTTTAGTT 53542
Score = 95.1 bits (104), Expect = 9e-14
Identities = 100/132 (76%), Gaps = 0/132 (0%)
Strand=Plus/Minus
Query 322243 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGC 322302
||| || |||| || |||||||| |||||||| || ||| ||||||| | | || ||
Sbjct 53722 ACCATACGCAATGGCAGCTGCAGTAGGTTCATTGATGATTCTAAGAACTTGAAGTCCAGC 53663
Query 322303 AATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGT 322362
|||| | ||||||| ||||| || | ||| | || |||||||| || ||||||||
Sbjct 53662 AATTGTTCCAGAATCCTTGGTTGCCTGACGCTGAGAATCGTTAAAATAGGCGGGTACAGT 53603
Query 322363 AATAACTGCTTT 322374
||||||||| ||
Sbjct 53602 AATAACTGCATT 53591
Score = 87.8 bits (96), Expect = 1e-11
Identities = 141/207 (68%), Gaps = 17/207 (8%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATC---- 518578
||||||| || || ||||||| || || |||| | |||||| ||||| || ||
Sbjct 53208 CAAAAATTGTGTTATTTGGATTCATGGCCACTTGGTTTTTGGCGGCATCACCGATNNNNN 53149
Query 518579 -------------AGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATT 518625
||| |||| || || || || | |||||| || ||||| || | ||
Sbjct 53148 NNNNNNNNNNNNNAGACGTTCGGTGTCCGTGAAGGCAACATAGGACGGAGTAGTCCTGTT 53089
Query 518626 ACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAA 518685
||| || || || ||||||||||||||||| |||| ||| | || || || || |
Sbjct 53088 ACCCTGGTCGTTTGCAATAATTTCAACTTTCCCATGTTGGAAAACTCCAACGCAGGAGTA 53029
Query 518686 AGTTGTTCCTAAATCAATACCAATAGC 518712
||||||||| | ||| ||||| | |||
Sbjct 53028 AGTTGTTCCAAGATCGATACCTACAGC 53002
>seq1422
Length=293292
Score = 239 bits (264), Expect = 3e-57
Identities = 398/571 (70%), Gaps = 3/571 (1%)
Strand=Plus/Minus
Query 517270 AAGA-ATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAG 517328
|||| |||||||| |||||||| || || ||||||||||||| ||| || ||||| | |
Sbjct 165306 AAGACATACCATTAGCATCCAAGTCGAAAGTGACTTCAATTTTAGGAACTCCTCTAGGCG 165247
Query 517329 CAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTC 517388
|||||||||| || ||||||||| || || || |||||||| || || | ||
Sbjct 165246 CAGGTGGGATTCCAGTCAAATTAAAGGTACCAAGCAAGTTATTATCCTTGGTCATAGCTC 165187
Query 517389 GTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATA 517448
|||||| || |||| ||| || ||||| | | ||||| |||||||| || || || |
Sbjct 165186 TTTCACCTTCAAAAACTTGAATGGTAACAGCGTTCTGATTGTCTGAATAGGTGGTGAAGA 165127
Query 517449 CTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCAC 517508
| || ||| ||||| ||| | | |||||| |||| | || ||||||| ||| |
Sbjct 165126 TTTGTTGTTGTTTGCAAGGGATTCTGGAGTTTCTTTCAACCAGTTTAGTCATAACACCTC 165067
Query 517509 CTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTT 517568
| || || || | ||| ||||| | || | |||||| || || | || || ||||| ||
Sbjct 165066 CAGCAGTCTCAATACCTAGAGACAATGGTGCGACATCTACCAGTAAAACATCTTGAATTT 165007
Query 517569 TTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTT 517628
| ||| | ||| | |||||||||||||| ||| || |||||||| || ||||
Sbjct 165006 GAGAAGAAGTATCTCCACTTAAAATAGCTGCTTGAACAGCGGCGCCATATGCTACGGCTT 164947
Query 517629 CATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGT 517687
|||| ||||| | | |||||| |||| ||| |||||| | ||| || | || |
Sbjct 164946 CATCTGGATTGATGCTAAGATTTAGCGTTTTTCCACAGAAAAAGTCTTGCAACATCTT-T 164888
Query 517688 CTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTA 517747
| |||||||| | | ||| || |||||||| || | ||||| || | |||
Sbjct 164887 TGGATTTTAGGAATTCTTGTTGAACCACCAACTAAGACTACATCATGAACTGTTCCTTTG 164828
Query 517748 TCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCT 517807
|||| ||| | ||| |||| | ||||| || |||| | | | ||| || || ||
Sbjct 164827 TCCATTTTGGCATCGGTTAAAGCCTTTTCCACCGGTTGTAAAGTGGATCTGAATAAATCC 164768
Query 517808 GAACAAAGTTCTTCGAATTTAGCTCTAGTAA 517838
|| |||||||| ||| | || | |||||
Sbjct 164767 ATGCACAGTTCTTCAAATCTGGCACGAGTAA 164737
Score = 149 bits (164), Expect = 5e-30
Identities = 171/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
|| || |||| ||||||| | |||||| || || || |||| ||||||||||||
Sbjct 164384 CCTTCATCAATTGACAAAATCGACACATCAAAAGTACCGCCCCCCAAATCAAAAATAAGC 164325
Query 518144 ACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGT 518203
||||| | ||| | | || ||||| | |||||| || | ||| ||||| || |||
Sbjct 164324 ACATTTTTCTCTCCTTTTAAATTCTTATCCAAACCATATGCCAGAGCTGCAGCGGTCGGT 164265
Query 518204 TCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGT 518263
|| ||||| || | | ||||| | |||||||||| ||||||||||| || |||||
Sbjct 164264 TCGTTAATGATACGAAGCACATTCAAACCAGCAATTACACCTGCATCTTTGGTTGCTTGC 164205
Query 518264 CTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTAC 518313
||||| |||||||||||||| || ||||| || || || ||||| || ||
Sbjct 164204 CTTTGAGAATCGTTAAAATAGGCTGGAACGGTTATTACAGCATCTGTCAC 164155
Score = 86.0 bits (94), Expect = 5e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 366997 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 367056
||||| |||||||| ||||| ||||||||| ||||||| || | ||| || | |||
Sbjct 44545 GTAGCTACAATAGCTTTTGGAATGGGTATTGATAAACCCGACATAAGAAACGTGTTCCAT 44486
Query 367057 TATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116
||||| | | | | | ||| ||| | ||||||||||| | || ||||| || ||||||
Sbjct 44485 TATGGTGTTTCAAGTAGTATAGAAAGCTATTATCAAGAGGTAGGCAGAGCTGGACGTGAT 44426
Query 367117 GG 367118
||
Sbjct 44425 GG 44424
Score = 86.0 bits (94), Expect = 5e-11
Identities = 120/163 (74%), Gaps = 8/163 (5%)
Strand=Plus/Minus
Query 517924 TTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT--TCAAATCTGTTTTA 517981
||||||||| || || ||||||||||| ||| | | || ||| | |||| ||| ||||
Sbjct 164602 TTCACATGCAGTTCTGAGTCTTCGTAAAGCTCTAG-TG-TTGCTGCTCAAGTCTTTTTTG 164545
Query 517982 TATTTTCTCTTGAAATCTTCAACACACCATG--TTACAAGACGATTATCAAAATCTTCAC 518039
| |||||||| || || ||||| | ||| |||| ||||| |||||||| |||||||
Sbjct 164544 AACTTTCTCTTAAATTCCTCAACGAA--ATGGTTTACTAGACGGTTATCAAAGTCTTCAC 164487
Query 518040 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAG 518082
| || || | ||| | || | || | | ||||||| || ||
Sbjct 164486 CACCTAAGTGAGTGTCACCAGCAGTCGATTTTACTTGAAACAG 164444
>seq1585
Length=20535
Score = 125 bits (138), Expect = 5e-23
Identities = 111/139 (80%), Gaps = 0/139 (0%)
Strand=Plus/Minus
Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225
||||||| | ||||| || | |||||| ||||| || ||||| || | |||||| ||||
Sbjct 17236 TTTTATCCATGCCATAAGCCAGAGCAGCGGCAGTGGGCTCATTGATCACTCTCAACACAT 17177
Query 518226 TAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATG 518285
| | ||||| ||| || |||||||| || || |||||||| ||||||||||||||||
Sbjct 17176 TCAAACCAGATATTTGACCAGCATCTTTTGTAGCCTGTCTTTGAGAATCGTTAAAATATG 17117
Query 518286 CAGGAACAGTAATAACGGC 518304
| |||||||||| |||||
Sbjct 17116 CTGGAACAGTAACTACGGC 17098
>seq4867
Length=118623
Score = 105 bits (116), Expect = 5e-17
Identities = 106/138 (77%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289
||| ||||| ||||||||||||| |||||||| ||||| ||| |||||||| || ||
Sbjct 107859 ACCTGCAATAGTTCCTGCATCTTTGGTGGCTTGCCTTTGACTATCATTAAAATAAGCTGG 107918
Query 518290 AACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCAT 518349
||| || ||||| |||||||| | | | ||| | |||||| ||| || | ||||||
Sbjct 107919 AACTGTTATAACCGCATCAGTGATATTTCGACCTAAATAAGCTTCTGCGGTATCTTTCAT 107978
Query 518350 TTTACTTAAAATCATTGA 518367
||| |||| ||||| ||
Sbjct 107979 TTTTGTTAAGATCATAGA 107996
Score = 91.5 bits (100), Expect = 1e-12
Identities = 161/232 (69%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 518426 GGTTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTT 518485
||||| |||| ||||||| || ||||| ||||| |||||| || ||||| ||
Sbjct 108115 GGTTTTCCACCATCATTAATGACCTTAAAAGGCCATAGTTTCATGTCCTGTTGAATTTTT 108174
Query 518486 TGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTA 518545
|| | ||| | | ||||| | || |||||| || || | ||||||| | || ||
Sbjct 108175 GAATCGTCAAATTTCCGTCCAATAAGTCTTTTTGCGTCGAATACAGTATTGTTCGGGTTC 108234
Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACA 518605
||||| | |||| ||| ||||||||||| || || ||| || || || || | |||
Sbjct 108235 ATTGCCACCTGATTTTTAGCTGCATCTCCTATTAGTCTTTCCGTTTCCGTGAAAGCCACA 108294
Query 518606 TATGATGGAGTTGTGCGATTACCTTGA---TCATTCGCAATAATTTCAACTT 518654
|| || |||||||| || ||| || ||||| | || |||| |||||
Sbjct 108295 TAACTGGGTGTTGTGCGGTTCCCTGGAAATTCATTTG-AAAAATT--AACTT 108343
>seq340
Length=197767
Score = 104 bits (114), Expect = 2e-16
Identities = 141/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 518099 AAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG 518158
|||| | ||| ||| ||| ||||| || | ||||||||| | || | ||||||
Sbjct 17161 AAAATCGATACGTCAAAGGTACCACCTCCAAAATCAAAAATCAAGACGTAACGTTCTTTT 17102
Query 518159 TCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTC 518218
|| || ||||| ||||||||||| | | ||||| || ||||| || || ||||
Sbjct 17101 TCACTTTTCTTATCTAGACCATACGCTATGGAGGCAGCTGTAGGTTCGTTTATTATTCGT 17042
Query 518219 AAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTA 518278
|| | ||||| ||||| | |||||||| ||||| ||||| ||||| || ||||||
Sbjct 17041 TGGACGTCGAGACCTGCAATGGTACCTGCATCCTTAGTAGCTTGCCTTTGGGAGTCGTTA 16982
Query 518279 AAATATGCAGGAACAGT 518295
||||| || || || ||
Sbjct 16981 AAATAAGCCGGTACTGT 16965
Score = 95.1 bits (104), Expect = 9e-14
Identities = 177/256 (69%), Gaps = 3/256 (1%)
Strand=Plus/Minus
Query 517292 TCAAA-TGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATT 517350
||||| || ||||| |||||||| || ||||| | || ||||| || ||| | || |
Sbjct 18080 TCAAAGTGGTACTTCGATTTGAGGAACTCCTCTGGGTGCTGGTGGTATTCCTGCTAAGTC 18021
Query 517351 AAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGAT 517410
||| |||| ||| |||||| ||| | |||||||||||| | | ||| ||
Sbjct 18020 AAAACGACCCAATAGATTGTTATCTCGAGTCATACCTCGTTCACCCTCATAGACTTGAAT 17961
Query 517411 -AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAA 517469
|||| || | | ||||| || ||| | || | ||||| | || | |||||| ||||
Sbjct 17960 GAGTA-CTCCGGGCTGATTGTCAGAAAATGTGGAAAATATTTGGGTGTGTTTACATGGAA 17902
Query 517470 TTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAG 517529
|||| ||||||| | ||| | ||||| || || || || ||||| | || || |
Sbjct 17901 TTGTACTGTTTCTTTTAATTAACACCGTCATTATTCCTCCGGCCGTTTCAATGCCCAGTG 17842
Query 517530 AAAGAGGAGTGACATC 517545
| | |||||||||||
Sbjct 17841 ATAACGGAGTGACATC 17826
>seq1278
Length=21786
Score = 102 bits (112), Expect = 6e-16
Identities = 137/191 (72%), Gaps = 5/191 (3%)
Strand=Plus/Plus
Query 518162 TGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAA 518221
|| || |||||||||||||| |||| | |||| | |||||| | ||||| |
Sbjct 19517 TGTTTCTTATCAAGACCATAAGCAAGTG-----GCAGCCGATTCATTTACTATTCTGCAT 19571
Query 518222 ACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAA 518281
||||| | || || ||| ||||||||||||| || ||||| ||| || ||||| ||
Sbjct 19572 ACATTTAATCCGGCGATTTTTCCTGCATCTTTTGTTGCTTGATATTGAGAGTCGTTGAAG 19631
Query 518282 TATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTT 518341
||||| || || || | || ||||| ||||||| | |||| |||||| ||| | |
Sbjct 19632 TATGCTGGCACTGTTTTCACAGCATCTTTTACTTCCTCTCCAAAATAAGCTTCTGCTGCT 19691
Query 518342 TGTTTCATTTT 518352
| |||||| ||
Sbjct 19692 TCTTTCATGTT 19702
>seq970
Length=61088
Score = 102 bits (112), Expect = 6e-16
Identities = 119/158 (75%), Gaps = 2/158 (1%)
Strand=Plus/Plus
Query 668850 TAAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAACGTGTCGATATGTCTG 668909
||| ||||||||||||| | ||| | || || | ||||| |||||||||||| | ||||
Sbjct 4927 TAAAAGGTAAAGAAGGTAGAATTCGTGGTAACCTTATGGGGAAACGTGTCGATTTCTCTG 4986
Query 668910 CACGTACAGTTATTACTTCTGATCCCAATATTGCTC-TCAATGAAGTTGGTGTTCCTCTT 668968
||||||| |||||||| | ||||| || |||| | | || ||||||| |||||
Sbjct 4987 CACGTACGGTTATTACACCAGATCCTAA-CTTGCGCATTGATCAAGTTGGCGTTCCAAGG 5045
Query 668969 ATTATTGCTAAAAATCTTACTTTTGACGAAATTGTAAC 669006
| |||||| ||||| | || ||| |||||||| ||
Sbjct 5046 AGCATTGCTCAAAATATGACGTTTCCTGAAATTGTTAC 5083
>seq820
Length=22770
Score = 100 bits (110), Expect = 2e-15
Identities = 135/188 (72%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 400503 ACTGTTTGGGAAATTCCTCAAAAATCCATCATTGAAATGGCAGCTGATAGAGCACCTTTT 400562
||||||||||||||||||||||| ||||| || ||||| || ||||||| |||||
Sbjct 22243 ACTGTTTGGGAAATTCCTCAAAAGGTAATCATAGACATGGCGGCGGATAGAGGCGCTTTT 22302
Query 400563 GTTGATCAAACTCAGAGTATGAATTTGTACATTGATAAACCTAGTTTTGCAAGATTAAAT 400622
| ||||||||||| ||| | || | |||| | ||||||| | || ||||
Sbjct 22303 ATCGATCAAACTCAAAGTTTAAACATTCACATCGCGAAACCTACCTATGGGGTATTATGC 22362
Query 400623 TCTTGTCTATTTTATGCATGGAGGAAAGGTCTCAAAACCGGTATGTATTATTTGAGATCT 400682
|| | ||||| | |||| || ||||| ||||| || ||||| ||||| ||| |
Sbjct 22363 TCAATGCACTTTTACGGTTGGAAAAAGGGTCTTAAAACTGGAATGTACTATTTAAGAACA 22422
Query 400683 AAACCAGC 400690
||||| ||
Sbjct 22423 AAACCCGC 22430
>seq97
Length=141497
Score = 91.5 bits (100), Expect = 1e-12
Identities = 114/154 (74%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 518230 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 518289
||||||||| | || ||||||||||| ||||| | ||| | ||| ||||| || || ||
Sbjct 93042 ACCAGCAATGGTACCAGCATCTTTAGTAGCTTGACGTTGGGCATCATTAAAGTACGCGGG 93101
Query 518290 AACAGTAATAACGGCATCAGTTAC-TTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCA 518348
|| |||| || |||| || || |||||| |||| |||||| || |||| ||||
Sbjct 93102 CACTGTAACTACTGCATGGGTGACTTTCTTTCCCAA-ATAAGCTTCAGCAGTTTCCTTCA 93160
Query 518349 TTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382
|||| |||||| ||| | ||||| | ||| ||
Sbjct 93161 TTTTTGTTAAAACCATAGCGGAAATCTCTTCGGG 93194
>seq1579
Length=8058
Score = 86.0 bits (94), Expect = 5e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265
||| || ||||||| ||||| || || ||||| |||||||||||| || ||||| ||
Sbjct 5195 ATTGATGATTCTCATTACATTCAGTCCTGCAATAACTCCTGCATCTTTGGTAGCTTGCCT 5136
Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307
|||||| || || || ||||| || || |||| |||||| ||
Sbjct 5135 TTGTGAGTCATTGAAGTATGCCGGGACTGTAACAACGGCGTC 5094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780033588118576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |