Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq820 129 7e-25 >seq820 Length=22770 Score = 129 bits (142), Expect = 7e-25 Identities = 203/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 112283 AGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTG 112342 ||| ||| | | |||||| || |||||||| || |||||||||||||||||||| || Sbjct 21204 AGCCATTGTAACTTCTCAAGTAGAAACTGGTACTCCTTATATGCTTTACAAAGACGCTTG 21263 Query 112343 TAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGA 112402 || ||| |||||||||||| ||||| ||||| || | ||||| ||| | || Sbjct 21264 CAATAGAAAATCTAATCAAAAGAACTTGGGAGTGATAAAAGGCAGTAACCTTTGTTCTGA 21323 Query 112403 AATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCT 112462 |||| | |||| || || || | ||||| ||||| || || ||||| || | Sbjct 21324 AATCGTAGAATACACGTCGCCCGACGAAATTGCTGTCTGTAATCTGGCTTCAATACCTGT 21383 Query 112463 CCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTAC 112522 || || ||| || |||| | ||||| ||||||| |||||||||| | | | || Sbjct 21384 GAACATGTTTGTTAATGCAGATAGAAAGAGTTTTGATTTTGAAAAACTCAAAAATATCAC 21443 Query 112523 GAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 112573 |||| || || | |||| | || | |||| |||| ||| | |||||| Sbjct 21444 TAAAATAGTGACTAGAAACTTGAATAAGATTATCGATATAAACTATTACCC 21494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620619058485120