Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq3936 127 2e-24
>seq3936
Length=42514
Score = 127 bits (140), Expect = 2e-24
Identities = 337/507 (66%), Gaps = 12/507 (2%)
Strand=Plus/Plus
Query 154626 TTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATAC 154685
|| ||||| ||| || | || ||||| |||||||| || ||| || || | |
Sbjct 39208 TTTCAACCAAACAGCGGCGCCCAAGGTGAATATGCAGGGTTGCGAGCGATTCAG---TGC 39264
Query 154686 CATCAAGGATCAGGAGATGATAAA---AGAAATGTATGTTTGATACCAGAGTCAGCACAT 154742
|||| | | || || ||| ||| ||| | || |||||||| || | || |||
Sbjct 39265 TATCACGAAGCAAAAGGTGACAAACATAGAGACGTCTGTTTGATTCCTGTAAGCGCTCAT 39324
Query 154743 GGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT 154802
||||||||||| ||||| || ||||| || |||| ||| | | ||||| ||||
Sbjct 39325 GGAACTAATCCAGCTAGCGCCCAAATGGCTGGTATGAGAGTGGAACCGGTCAAA-GTGAA 39383
Query 154803 GA-TGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGA 154861
| ||| || | ||| || | |||| || | || || | | || | |
Sbjct 39384 AAATGACGGCACCATTGATGTATCAGATTTAAAATCTAAGGCCGAAAAGTTTAAAAATCG 39443
Query 154862 ACTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAG 154921
||| || ||| | ||||||||||| || || || | || |||||||| | || |||
Sbjct 39444 ACTATCGTGTCTCATGATTACATATCCTTCAACTAACGGAGTATTTGAGGAT-ACCGTAG 39502
Query 154922 ACAGA--TATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAAT 154979
|||| ||||| | || ||| | || || ||||| ||||| | || || || |||
Sbjct 39503 -CAGAAGTATGTGAAATAACCCATAAGAACGGAGGTCAAGTATACTTGGACGGTGCTAAT 39561
Query 154980 CTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTA 155039
| ||||| || || || || | ||| |||| || || || || | |||| ||
Sbjct 39562 ATGAATGCTCAAGTGGGTCTCTGCAGACCGGGTGATTACGGAAGCGACGTGTCTCATTTA 39621
Query 155040 AACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATA 155099
|| ||||| |||||||| ||||| || ||||| |||||||| ||||| | ||||||||
Sbjct 39622 AATTTACACAAAACATTTTGTATCCCGCATGGGGGTGGAGGACCTGGTATGGGTCCTATT 39681
Query 155100 GGTGTAGCAAAACATCTCACACCATTT 155126
|| ||| | |||| | | ||||||
Sbjct 39682 GGAGTAAAATCACATTTAGCTCCATTT 39708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579097710416640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |