Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq3936 132 6e-26
>seq3936
Length=42514
Score = 132 bits (146), Expect = 6e-26
Identities = 338/507 (67%), Gaps = 12/507 (2%)
Strand=Plus/Plus
Query 159301 TTACAACCTAACGCAGGATCACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATAC 159360
|| ||||| ||| || | || ||||| |||||||| || ||| || || | |
Sbjct 39208 TTTCAACCAAACAGCGGCGCCCAAGGTGAATATGCAGGGTTGCGAGCGATTCAG---TGC 39264
Query 159361 CATCAAGGATCAGGAGATGATAAA---AGAAATGTATGTTTGATACCAGAGTCAGCACAT 159417
|||| | | || || ||| ||| ||| | || |||||||| || | || |||
Sbjct 39265 TATCACGAAGCAAAAGGTGACAAACATAGAGACGTCTGTTTGATTCCTGTAAGCGCTCAT 39324
Query 159418 GGAACTAATCCTGCATCAGCAGTGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGAT 159477
||||||||||| || || ||||| || |||| ||| | | ||||| ||||
Sbjct 39325 GGAACTAATCCAGCTAGCGCCCAAATGGCTGGTATGAGAGTGGAACCGGTCAAA-GTGAA 39383
Query 159478 GA-TGATGGCAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCATGAATACATTTGA 159536
| ||| |||| ||| || | |||| || | || || | | || | |
Sbjct 39384 AAATGACGGCACCATTGATGTATCAGATTTAAAATCTAAGGCCGAAAAGTTTAAAAATCG 39443
Query 159537 ACTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAG 159596
||| || ||| | |||||||||||||| || || | || |||||||| | | | ||
Sbjct 39444 ACTATCGTGTCTCATGATTACATATCCTTCAACTAACGGAGTATTTGAGGATACCGT-AG 39502
Query 159597 ACAGA--TATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAAT 159654
|||| ||||| | || ||| |||| || ||||| ||||| | || ||||| |||
Sbjct 39503 -CAGAAGTATGTGAAATAACCCATAAGAACGGAGGTCAAGTATACTTGGACGGTGCTAAT 39561
Query 159655 CTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTA 159714
| ||||| || || ||||| | ||| |||| || || || || | |||| ||
Sbjct 39562 ATGAATGCTCAAGTGGGTCTCTGCAGACCGGGTGATTACGGAAGCGACGTGTCTCATTTA 39621
Query 159715 AACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATT 159774
|| ||||| || ||||| ||||| || ||||| |||||||| ||||| | |||||||||
Sbjct 39622 AATTTACACAAAACATTTTGTATCCCGCATGGGGGTGGAGGACCTGGTATGGGTCCTATT 39681
Query 159775 GGTGTAGCAAAACATCTCACACCATTT 159801
|| ||| | |||| | | ||||||
Sbjct 39682 GGAGTAAAATCACATTTAGCTCCATTT 39708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 587934354226560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |