Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq1411 93.3 3e-14
>seq1411
Length=135556
Score = 93.3 bits (102), Expect = 3e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| || || || |||| ||||||||| | ||| || ||||||||||| ||||| |
Sbjct 108590 TTCCGCCTCTTAATCTCAGAACCAAGTGCAATGTTGACTCCTTCTGAATGTTGTAGTCAG 108531
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
||||| | ||| |||| || | |||||||||||||| || | || || |||||| | |
Sbjct 108530 AAAGGGTACGTCCATCTTCTAATTGTTTTCCGGCAAAAATCAATCTCTGTTGGTCTGGAG 108471
Query 34873 GCACCCCCTCCTTG 34886
| | || ||||||
Sbjct 108470 GAATACCTTCCTTG 108457
Score = 86.0 bits (94), Expect = 4e-12
Identities = 85/110 (77%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
||||| ||||| || ||||||||||| | ||| |||||| ||||| || ||||| |||
Sbjct 108334 CCTCCTCTCAATCTTAAAACCAAGTGGAGGGTGGATTCTTTTTGAATATTGTAGTCTGAA 108275
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTG 34864
||| | || |||| |||| |||||||| || || |||| ||||| ||
Sbjct 108274 AGGGTACGACCATCTTCCAATTGTTTTCCAGCGAAGATTAAACGTTGTTG 108225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324570707921088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |