Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq4764 264 9e-65 seq1422 255 5e-62 seq1411 116 3e-20 seq97 111 1e-18 seq340 107 2e-17 seq4656 98.7 8e-15 seq347 98.7 8e-15 seq820 96.9 3e-14 seq970 95.1 1e-13 seq1585 91.5 1e-12 seq4867 89.7 4e-12 seq4409 86.0 5e-11 >seq4764 Length=58292 Score = 264 bits (292), Expect = 9e-65 Identities = 592/878 (67%), Gaps = 16/878 (2%) Strand=Plus/Plus Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816 ||||||||| |||| ||| | |||| ||| || |||| | || ||||||||| Sbjct 53993 GAAGATGGTATCTTCGAAGTAAAATCTACCGCTGGTGACACTCACTTGGGAGGCGAAGAT 54052 Query 551817 TTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTG 551874 || || || ||| |||| |||| | ||| |||| || ||||| ||| |||| | Sbjct 54053 TTCGACAACAGAATGGTTAATCAC--TTTGTCCAAGAATTCAAACGTAAATACAAGAAAG 54110 Query 551875 ATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAAC 551934 |||| || | | | |||| | | || | ||||| ||||| |||||||| ||| Sbjct 54111 ATCTGACTTCTAATAAGAGAGCTTTAAGGCGATTGAGAACCGCTTGTGAAAGAGCGAAAA 54170 Query 551935 GAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTG 551994 || ||||||| || |||||| ||| |||||| | ||||| | ||||||||||||| Sbjct 54171 GAACTCTTTCTTCATCAACTCAAGCCAGTATTGAGATCGATTCTCTGTTTGAGGGAATTG 54230 Query 551995 ATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAA 552054 | | | || | ||| | | || || ||||| | | |||||||| | Sbjct 54231 ACTTCTACACTTCCATTACTCGTGCTCGTTTCGAAGAATTGAACGCCGATCTCTTCCGTT 54290 Query 552055 AAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTAC 552114 || || ||||| |||||| | | | | ||| | || || || ||| || |||| | Sbjct 54291 CCACCATGGAACCCGTAGAAAAGGCCATTCGCGATGCTAAAATGGACAAAGCCCAAGTTC 54350 Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAG 552172 | || ||||| | ||||||||||| || | ||||| ||| ||| || | | ||| Sbjct 54351 ACGACATTGTTTTGGTTGGTGGATCAACTCGTATTCCAAAAGTTCAAAAACTACTACAAG 54410 Query 552173 TTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTA 552232 | || ||| ||||| ||| |||| || || | | ||||| ||||||||||||||||| Sbjct 54411 AT-TTCTTT-AATGGAAAAGAATTGAACAAATCTATCAATCCCGATGAGGCTGTTGCCTA 54468 Query 552233 TGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACAAA-CTGATGAAAAACTACAAAA 552289 ||||| ||| | || || ||||| | | || ||| |||| | || ||||| | Sbjct 54469 CGGTGCTGCAGTACAGGCCGCTATATTACACGGCGATAAATCTGAGG---AAGTACAAGA 54525 Query 552290 TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTAT 552349 | | | ||| | || || ||||| | ||| | ||| | ||||| | ||| ||| | || Sbjct 54526 TTTACTTCTTCTTGACGTAACTCCATTGTCTTTGGGTATTGAAACTGCTGGTGGTGTGAT 54585 Query 552350 GACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC 552409 ||| ||||| | ||||| ||||||||||| ||| || ||| |||| |||| Sbjct 54586 GACAGCCCTTATTAAGAGAAACACTACTATTCCCACTAAGCAAACTCAAACATTTACTAC 54645 Query 552410 GTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCAC 552469 || || ||||||||| ||| || |||||| | | ||||| ||| | | || Sbjct 54646 CTACTCTGATAATCAACCTGGGGTACTTATTCAAGTATACGAAGGTGAACGTGCCATGAC 54705 Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529 || || |||| || |||| || | || || || || || |||||||| || Sbjct 54706 CCGTGACAACAATCTTCTGGGTAAATTCGAATTGACTGGAATCCCGCCAGCTCCTCGCGG 54765 Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || ||||| ||||| |||||||| ||||| || || || |||||||| || || || Sbjct 54766 TGTGCCTCAAATCGAAGTAACTTTCGACATCGACGCAAACGGTATTTTGAACGTAACCGC 54825 Query 552590 TTGTGATAAATCTAGCAACAAGAGTAAA-AATATTACT 552626 ||| || || | |||||| || ||| || |||||| Sbjct 54826 CATTGAAAAGTCGACCAACAA-AGAAAATAAAATTACT 54862 Score = 125 bits (138), Expect = 6e-23 Identities = 141/186 (76%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAAC 550410 |||||||| |||| || || | | |||| |||| || || ||||||| || || Sbjct 53546 AAAATGAAGGAAACCGCTGAAGCCTAT-TTGGGCAAGGCTGTGACCAATGCAGTTATTAC 53604 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 |||||| || |||||||| || || || ||||| || || || ||| ||||| ||||| Sbjct 53605 TGTACCCGCCTATTTTAACGATTCTCAGCGTCAGGCAACCAAGGATTCTGGAACAATTGC 53664 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 ||||||| | |||||| | || ||||||||||||||||| ||||| |||| ||||| || Sbjct 53665 TGGACTTCAAGTTCTTAGAATCATCAATGAACCTACTGCAGCTGCCATTGCGTATGGTCT 53724 Query 550531 TGATAA 550536 || || Sbjct 53725 GGACAA 53730 Score = 113 bits (124), Expect = 4e-19 Identities = 103/130 (79%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051 ||| ||||||| ||| | ||||| || || || ||||| |||| ||| |||| ||| Sbjct 53002 GCTGTAGGTATCGATCTTGGAACAACTTACTCCTGCGTTGGAGTTTTCCAACATGGGAAA 53061 Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 |||||||||||||| || || || |||||||| |||||||| || |||||| | |||||| Sbjct 53062 GTTGAAATTATTGCAAACGACCAGGGTAACAGGACTACTCCGTCCTATGTTGCCTTCACG 53121 Query 550112 GAAACTGAAC 550121 || || |||| Sbjct 53122 GACACCGAAC 53131 >seq1422 Length=293292 Score = 255 bits (282), Expect = 5e-62 Identities = 394/559 (70%), Gaps = 4/559 (1%) Strand=Plus/Plus Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077 |||| ||||||||| | || ||| | || ||| || | |||| || ||| | Sbjct 164745 GCCAGATTTGAAGAACTGTGCATGGATTTATTCAGATCCACTTTACAACCGGTGGAAAAG 164804 Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137 | ||||| ||| | || || || ||| | ||| ||||| | || | |||||||| Sbjct 164805 GCTTTAACCGATGCCAAAATGGACAAAGGAACAGTTCATGATGTAGTCTTAGTTGGTGGT 164864 Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAAT 552195 || ||||||||||||||||| | | ||||| ||| ||| |||| ||| |||| Sbjct 164865 TCAACAAGAATTCCTAAAATCCAAAAGATGTTGCAAGA-CTT-TTTCTGTGGAAAAACGC 164922 Query 552196 TAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTA 552255 ||||| || | ||||||||||| || || || ||||| ||||| |||||||||||| Sbjct 164923 TAAATCTTAGCATCAATCCAGATGAAGCCGTAGCATATGGCGCCGCTGTTCAAGCAGCTA 164982 Query 552256 TTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTC 552315 || | |||| | ||| | || | ||| || || |||| |||||||| | || Sbjct 164983 TTTTAAGTGGAGATACTTCTTCTCAAATTCAAGATGTTTTACTGGTAGATGTCGCACCAT 165042 Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375 | ||||| ||| | || || | ||||||| |||||||||| || | || ||||| | | Sbjct 165043 TGTCTCTAGGTATTGAGACTGCTGGAGGTGTTATGACTAAACTGGTTGAAAGAAACTCCA 165102 Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435 || ||||| ||| || | | || | || |||||||| ||||| | ||||||| Sbjct 165103 GAATCCCTTGCAAACAACAACAAATCTTCACCACCTATTCAGACAATCAGAACGCTGTTA 165162 Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495 | |||||| |||||||||| |||||| | || || |||||||| |||||||| | Sbjct 165163 CCATTCAAGTTTTTGAAGGTGAAAGAGCTATGACCAAGGATAATAACTTGCTTGGTACCT 165222 Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555 ||||||| || || || ||||| ||| | ||||| || |||||||||| ||||||| Sbjct 165223 TTAATTTGACTGGAATCCCACCTGCGCCTAGAGGAGTTCCTAAAATTGAAGTCACTTTCG 165282 Query 552556 ATATCGATGCCAATGGAAT 552574 | | ||||| ||||| || Sbjct 165283 ACTTGGATGCTAATGGTAT 165301 >seq1411 Length=135556 Score = 116 bits (128), Expect = 3e-20 Identities = 123/160 (77%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314 |||||||| || | ||| | ||| ||| ||||| || ||||| |||| ||||| | Sbjct 108805 AGACGGAGCACCAAATGTAAGGTGGACTCCTTTTGG--ATGTTGTAGTCAGAGAGAGTAC 108748 Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 | |||||||||||||||||| || || || | || |||||||| ||||||||||||| Sbjct 108747 GTCCATCTTCAAGTTGTTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATTCCTT 108688 Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414 |||| ||||||||||| |||||| ||||| ||||| Sbjct 108687 CTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATC 108648 >seq97 Length=141497 Score = 111 bits (122), Expect = 1e-18 Identities = 122/160 (76%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374 |||| | || ||| | ||||| |||||||||||| |||||||| |||| || || Sbjct 93201 ATTTGCTCCCGAAGAGATTTCCGCTATGGTTTTAACAAAAATGAAGGAAACTGCTGAAGC 93142 Query 550375 TTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 || | |||| ||||| || || |||||||| | || || || || || |||||||| Sbjct 93141 TTAT-TTGGGAAAGAAAGTCACCCATGCAGTAGTTACAGTGCCCGCGTACTTTAATGATG 93083 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 | |||||||||||||||||||||||||| |||||||| Sbjct 93082 CCCAACGTCAAGCTACTAAAGATGCTGGTACCATTGCTGG 93043 Score = 89.7 bits (98), Expect = 4e-12 Identities = 127/178 (71%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085 ||||||| || | |||||||| || ||||| || || ||||||||||||||||||| Sbjct 93549 GTGTTGGAGTGTACAAAAATGGTCGTGTGGAAATCATCGCTAATGATCAAGGTAACAGAA 93490 Query 550086 CTACTCCATCTTATGTTTCTTTCAC---GGAAACTGAACATTTAGTTGGTGATGCAGCAA 550142 || || ||||| || | || || || ||||| | | |||| ||||| || | Sbjct 93489 TAACACCTTCTTACGTGGCCTTTACTGGTGATGGTGAACGTCTTATTGGGGATGCCGCCA 93430 Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGG 550200 || ||||| ||| ||||| |||||| | |||||||||||||| | ||||| Sbjct 93429 AAAATCAATTGACTACAAATCCGGAAAATACTGTCTTTGATGCTAAACGACTCATTGG 93372 >seq340 Length=197767 Score = 107 bits (118), Expect = 2e-17 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 ||||| | | |||||| | || ||||| || |||||||| ||||| ||| | ||||||| Sbjct 16945 AAGTTTCCAAAGCAGTAGTCACAGTACCGGCTTATTTTAACGACTCCCAAAGGCAAGCTA 17004 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508 |||| ||||| || ||||| || || | || | || || || || |||||||| | Sbjct 17005 CTAAGGATGCAGGTACCATTGCAGGTCTCGACGTCCAACGAATAATAAACGAACCTACAG 17064 Query 550509 CTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCT 550568 |||| | | || ||||| || ||||| | | ||| |||||| | | || | || | Sbjct 17065 CTGCCTCCATAGCGTATGGTCTAGATAAGAAAAGTGAAAAAGAACGTTACGTCTTGATTT 17124 Query 550569 TTGATTGTGGAGGT 550582 |||||| ||||||| Sbjct 17125 TTGATTTTGGAGGT 17138 Score = 102 bits (112), Expect = 7e-16 Identities = 247/366 (67%), Gaps = 10/366 (3%) Strand=Plus/Plus Query 551912 AACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971 |||||| |||||| |||| ||| || | | || | ||| || |||| || ||| | Sbjct 17384 AACTGCATGCGAACGAGCGAAAAGAACATTGTCCACATCTACACAGGCCACAATCGAAAT 17443 Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031 ||||| | ||| |||| ||| | | || || | ||| | |||| ||||| ||||| Sbjct 17444 TGATTCGATTGCTGATGGAAATGACTTTTATTCGTCGATTACTCGGGCGAAATTCGAAGA 17503 Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAA-CCAGTAGAACAAGTTTTAAGAGATT 552090 || || ||| | |||| ||| |||| ||||| ||| | ||| | |||| Sbjct 17504 AATCAACTCGGATATATTTAATTCCACA-TTGAGGCCAGTGGAAATGGCTTTGAAAGATG 17562 Query 552091 CAAAGATTG---ATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147 | ||| ||| | | ||| || || || | || | ||||||||||| || || | Sbjct 17563 CTAAG-TTGCGCAAAGATCAAATCGAC--GATGTCGTCTTGGTTGGTGGATCAACTAGGA 17619 Query 552148 TTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGT 552206 | || ||||||| | | | ||| || | || ||| || || | || ||| ||||| Sbjct 17620 TACCAAAAATTCAAGCACTTTTACAGGGGATGTTCCAA-GGAAAGGAGTTGAATAAAAGT 17678 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 |||| || ||||| |||||||| |||||||| || ||||||| || ||| | |||||| Sbjct 17679 ATTAACCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAAGCGGCAATTTTATCTGGA 17738 Query 552267 CAAACT 552272 | ||| Sbjct 17739 GACACT 17744 >seq4656 Length=6745 Score = 98.7 bits (108), Expect = 8e-15 Identities = 223/329 (68%), Gaps = 10/329 (3%) Strand=Plus/Plus Query 428086 TATTTTAGTTGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAAT 428145 ||||||||| | || |||||||| || || | ||||||||| |||| ||| ||||| Sbjct 5414 TATTTTAGTCATCCACCCAGTTCCAATACCATCAGCACCATTTACCAGAACCATCGGAAT 5473 Query 428146 GACTGGTGCATAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAA-AA 428204 | ||| ||| | |||||||| | | |||||| ||||||| | ||| | || Sbjct 5474 AATGGGTATATACCAAACGGGTTCAATTTTCTGATTATCATCATATTC-ATGTGTTAGAA 5532 Query 428205 TATCAAAATCATGCTCGAT-AAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATA 428263 | ||| | | ||| |||||| | || | | | || |||||| ||| Sbjct 5533 GGGCGTCATCGTT-TGGATGAAATATCAAACGTGTCAGTGGAGACATTTTTGTAAAAATA 5591 Query 428264 TATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTA---GTTCCAAATTGTCCATTA 428320 ||||| || ||||| || || || || || |||| | || |||||||| ||| Sbjct 5592 TATCTCGCACTTGCAGAGTCCTTTCCGCC---CATTAAACGGGTACCAAATTGACCACGT 5648 Query 428321 GGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTA 428380 || |||||||||||||||||| ||||| ||| ||||||| || | ||| || ||||| Sbjct 5649 GGTTCCAATAAATTAATATTATTGCTTCCGACAAAATTTTGAGCAAGATTCACGATGGTC 5708 Query 428381 CTAGTTAAGGATTGTTCACCATGATGATA 428409 | | ||| |||||| |||||||| Sbjct 5709 GCACAGAGAGATACTTCACCGTGATGATA 5737 >seq347 Length=95970 Score = 98.7 bits (108), Expect = 8e-15 Identities = 164/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 368817 AGGTTCTATGCCTTATGGTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAA 368876 |||||| |||||||||| ||| |||||||||||||| || ||||| | ||||| Sbjct 80544 AGGTTCGATGCCTTATGCGCAACAGCATTATCCATTTGAGAATGCAAAGGAATTTGA--- 80488 Query 368877 TGATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTT 368936 | ||| ||| | || ||||| | ||||| ||||| ||||| ||||| ||||| Sbjct 80487 --AGAAA-ATTTTCCAGCCGATTTCATCGCAGAAGGGATTGACCAAACTCGTGGATGGTT 80431 Query 368937 TTATACCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAAT 368996 ||||| || ||| | || || || | | | |||| | ||| ||||||| || | Sbjct 80430 CTATACTTTAACAGTTCTTTCAACTGCCCTATATGGTAAAGCTCCTTATAAAAATTTAGT 80371 Query 368997 AGTAACTGGTATTGTTAAT-GCATCTGATGGTCAAAAGATGTCAAAAAGTAAG 369048 || | |||| ||| || | || |||||||| || ||||||||| ||||| Sbjct 80370 GGTCAATGGT-TTGGTACTGGCTGGAGATGGTCAGAAAATGTCAAAACGTAAG 80319 >seq820 Length=22770 Score = 96.9 bits (106), Expect = 3e-14 Identities = 167/239 (70%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 685282 tttttttAAGATCGAGGAAAAAATAAATATCTGCATGCCAAGGTTCAATATAAATAGCAA 685341 ||||||| |||| | || | ||| ||| |||||||| ||||| | ||||||||| | Sbjct 20001 TTTTTTTGAGATTCAAAAAGTCAAAAACATCCGCATGCCATGGTTCCAAATAAATAGCGA 19942 Query 685342 ATGAACCAGCTCTTTTG---CCTCCTTGATTGGCATACCTCGATATATTATTAAATACAG 685398 | | |||| |||||| || || |||| |||| | | |||||||||| || Sbjct 19941 AAGCTCCAGGTCTTTTATTACCACCCTGATCCACATATTTGGCAGTATTATTAAACACTT 19882 Query 685399 TTA--ATACT--CGTAGACCACTTGCTGTGCCTTGTGTAGAATTAATATAAGATCCATCC 685454 | | ||| || |||||| | | ||||| | ||| | |||||||| || | Sbjct 19881 TAAGCATAGGAACG-AGACCATTGGAAGTGCCATTTGTGCCAGCAATATAAGTGCCTTGT 19823 Query 685455 GCCCTAATATTTGAAACATTTACACCAATTCCACCAGCATATTTACTAATCATAGCACA 685513 || |||||||| |||||||||||||||||| || |||| ||| ||| |||||||| Sbjct 19822 GCTCTAATATTATGAACATTTACACCAATTCCTCCTGCATTTTTTGAAATGATAGCACA 19764 >seq970 Length=61088 Score = 95.1 bits (104), Expect = 1e-13 Identities = 115/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 394007 GTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTA 394066 || ||||||||| ||| || | ||| ||||| | ||| | || |||| || | Sbjct 5083 GTAACAATTTCAGGAAACGTCATATTTTGAGCAATGCTCCTTGGAACGCCAACTTGATCA 5024 Query 394067 A-GAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCC 394125 | | |||| || ||||| | |||||||| ||||| | || | ||| |||||||| || Sbjct 5023 ATGCGCAAG-TTAGGATCTGGTGTAATAACCGTACGTGCAGAGAAATCGACACGTTTCCC 4965 Query 394126 CATAAGATTTCCACGAATTCTACCTTCTTTACCT 394159 |||||| || |||||||||||||||||||||||| Sbjct 4964 CATAAGGTTACCACGAATTCTACCTTCTTTACCT 4931 >seq1585 Length=20535 Score = 91.5 bits (100), Expect = 1e-12 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 || ||| | ||||| |||||||||||||| || || ||| | || ||||| ||||||||| Sbjct 17098 GCCGTAGTTACTGTTCCAGCATATTTTAACGATTCTCAAAGACAGGCTACAAAAGATGCT 17157 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519 || | || |||| | ||||| | | | |||||||| || ||||| ||||| || Sbjct 17158 GGTCAAATATCTGGTTTGAATGTGTTGAGAGTGATCAATGAGCCCACTGCCGCTGCTCTG 17217 Query 550520 GCATATGGACTTGATAAA 550537 || ||||| | |||||| Sbjct 17218 GCTTATGGCATGGATAAA 17235 >seq4867 Length=118623 Score = 89.7 bits (98), Expect = 4e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 |||| |||| | || ||| |||| |||||| | |||| ||||||||| | || || Sbjct 108023 AAACGATTTGCTCCCGAAGAAATCAGCTCTATGATCTTAACAAAAATGAAAGATACCGCA 107964 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 |||| | | |||| | | | || ||||| || ||||| || ||||| ||||||||| Sbjct 107963 GAAGCTTATTTAGGTCGAAATATCACTGATGCGGTTATAACAGTTCCAGCTTATTTTAAT 107904 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 || ||| | ||||| || |||||||| ||| |||||| || Sbjct 107903 GATAGTCAAAGGCAAGCCACCAAAGATGCAGGAACTATTGCAGG 107860 Score = 87.8 bits (96), Expect = 1e-11 Identities = 144/208 (69%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 552289 ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTA 552348 || || || | || || || || ||| | ||| | ||| | || || | |||||| | | Sbjct 106192 ATGTTTTATTGGTTGACGTAACACCTTTGTCTTTGGGTATTGAGACCGCTGGAGGAGTAA 106133 Query 552349 TGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA 552408 || | || || | || |||||| | | |||||||||||| || | | ||| | | Sbjct 106132 TGTCAAAAATTGTTGAAAGAAATGCAAGGATTCCTTGTAAACAAACACAAACCTTTACCA 106073 Query 552409 CGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCA 552468 | ||||| || || ||| | |||||||| |||||| | |||||||| |||||| | | Sbjct 106072 CATATTCGGACAACCAACCCGCTGTTACCATTCAAGTGTTTGAAGGTGAAAGAGCGATGA 106013 Query 552469 CTAAAGATAATAATCAACTTGGTACTTT 552496 | || ||||| |||| | | || | ||| Sbjct 106012 CCAAGGATAACAATCTATTAGGCAATTT 105985 >seq4409 Length=33873 Score = 86.0 bits (94), Expect = 5e-11 Identities = 155/223 (70%), Gaps = 4/223 (2%) Strand=Plus/Minus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || || || || | ||| | |||| ||| || |||||| ||||| | | ||| Sbjct 17977 CTCAGTCGAAGCACCAAATGTAAGGTAGATTCCTTTTGAATATTATAATCGGACAAAGTC 17918 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | | ||||| |||||||| ||||| || || | ||| ||||| || || ||||||||| Sbjct 17917 CGTCCGTCTTCCAGTTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGCGGAATTCCT 17858 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGA 563431 || || || ||||||||| ||||| ||||| || || | || | || || | Sbjct 17857 TCCTTGTCCTGAATTTTTGCCTTTACATTTTCAATAGTGTCCGACGGTTCG-AC-CTCAA 17800 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||| | || || || || | || || |||||||| ||||| Sbjct 17799 GAGTGATGGTCTTGCCCGTTAAGGTCTTTACGAAAATCTGCAT 17757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4028455347829040