Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq4764 264 9e-65
seq1422 255 5e-62
seq1411 116 3e-20
seq97 111 1e-18
seq340 107 2e-17
seq4656 98.7 8e-15
seq347 98.7 8e-15
seq820 96.9 3e-14
seq970 95.1 1e-13
seq1585 91.5 1e-12
seq4867 89.7 4e-12
seq4409 86.0 5e-11
>seq4764
Length=58292
Score = 264 bits (292), Expect = 9e-65
Identities = 592/878 (67%), Gaps = 16/878 (2%)
Strand=Plus/Plus
Query 551757 GAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGATTCTCATCTTGGTGGCGAAGAT 551816
||||||||| |||| ||| | |||| ||| || |||| | || |||||||||
Sbjct 53993 GAAGATGGTATCTTCGAAGTAAAATCTACCGCTGGTGACACTCACTTGGGAGGCGAAGAT 54052
Query 551817 TTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTAAACGAAAAAACAAAGTTG 551874
|| || || ||| |||| |||| | ||| |||| || ||||| ||| |||| |
Sbjct 54053 TTCGACAACAGAATGGTTAATCAC--TTTGTCCAAGAATTCAAACGTAAATACAAGAAAG 54110
Query 551875 ATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAAC 551934
|||| || | | | |||| | | || | ||||| ||||| |||||||| |||
Sbjct 54111 ATCTGACTTCTAATAAGAGAGCTTTAAGGCGATTGAGAACCGCTTGTGAAAGAGCGAAAA 54170
Query 551935 GAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTG 551994
|| ||||||| || |||||| ||| |||||| | ||||| | |||||||||||||
Sbjct 54171 GAACTCTTTCTTCATCAACTCAAGCCAGTATTGAGATCGATTCTCTGTTTGAGGGAATTG 54230
Query 551995 ATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAA 552054
| | | || | ||| | | || || ||||| | | |||||||| |
Sbjct 54231 ACTTCTACACTTCCATTACTCGTGCTCGTTTCGAAGAATTGAACGCCGATCTCTTCCGTT 54290
Query 552055 AAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTAC 552114
|| || ||||| |||||| | | | | ||| | || || || ||| || |||| |
Sbjct 54291 CCACCATGGAACCCGTAGAAAAGGCCATTCGCGATGCTAAAATGGACAAAGCCCAAGTTC 54350
Query 552115 ATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAG 552172
| || ||||| | ||||||||||| || | ||||| ||| ||| || | | |||
Sbjct 54351 ACGACATTGTTTTGGTTGGTGGATCAACTCGTATTCCAAAAGTTCAAAAACTACTACAAG 54410
Query 552173 TTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTA 552232
| || ||| ||||| ||| |||| || || | | ||||| |||||||||||||||||
Sbjct 54411 AT-TTCTTT-AATGGAAAAGAATTGAACAAATCTATCAATCCCGATGAGGCTGTTGCCTA 54468
Query 552233 TGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACAAA-CTGATGAAAAACTACAAAA 552289
||||| ||| | || || ||||| | | || ||| |||| | || ||||| |
Sbjct 54469 CGGTGCTGCAGTACAGGCCGCTATATTACACGGCGATAAATCTGAGG---AAGTACAAGA 54525
Query 552290 TATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTAT 552349
| | | ||| | || || ||||| | ||| | ||| | ||||| | ||| ||| | ||
Sbjct 54526 TTTACTTCTTCTTGACGTAACTCCATTGTCTTTGGGTATTGAAACTGCTGGTGGTGTGAT 54585
Query 552350 GACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC 552409
||| ||||| | ||||| ||||||||||| ||| || ||| |||| ||||
Sbjct 54586 GACAGCCCTTATTAAGAGAAACACTACTATTCCCACTAAGCAAACTCAAACATTTACTAC 54645
Query 552410 GTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCAC 552469
|| || ||||||||| ||| || |||||| | | ||||| ||| | | ||
Sbjct 54646 CTACTCTGATAATCAACCTGGGGTACTTATTCAAGTATACGAAGGTGAACGTGCCATGAC 54705
Query 552470 TAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGG 552529
|| || |||| || |||| || | || || || || || |||||||| ||
Sbjct 54706 CCGTGACAACAATCTTCTGGGTAAATTCGAATTGACTGGAATCCCGCCAGCTCCTCGCGG 54765
Query 552530 AGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589
|| || ||||| ||||| |||||||| ||||| || || || |||||||| || || ||
Sbjct 54766 TGTGCCTCAAATCGAAGTAACTTTCGACATCGACGCAAACGGTATTTTGAACGTAACCGC 54825
Query 552590 TTGTGATAAATCTAGCAACAAGAGTAAA-AATATTACT 552626
||| || || | |||||| || ||| || ||||||
Sbjct 54826 CATTGAAAAGTCGACCAACAA-AGAAAATAAAATTACT 54862
Score = 125 bits (138), Expect = 6e-23
Identities = 141/186 (76%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAAC 550410
|||||||| |||| || || | | |||| |||| || || ||||||| || ||
Sbjct 53546 AAAATGAAGGAAACCGCTGAAGCCTAT-TTGGGCAAGGCTGTGACCAATGCAGTTATTAC 53604
Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470
|||||| || |||||||| || || || ||||| || || || ||| ||||| |||||
Sbjct 53605 TGTACCCGCCTATTTTAACGATTCTCAGCGTCAGGCAACCAAGGATTCTGGAACAATTGC 53664
Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530
||||||| | |||||| | || ||||||||||||||||| ||||| |||| ||||| ||
Sbjct 53665 TGGACTTCAAGTTCTTAGAATCATCAATGAACCTACTGCAGCTGCCATTGCGTATGGTCT 53724
Query 550531 TGATAA 550536
|| ||
Sbjct 53725 GGACAA 53730
Score = 113 bits (124), Expect = 4e-19
Identities = 103/130 (79%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 549992 GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAA 550051
||| ||||||| ||| | ||||| || || || ||||| |||| ||| |||| |||
Sbjct 53002 GCTGTAGGTATCGATCTTGGAACAACTTACTCCTGCGTTGGAGTTTTCCAACATGGGAAA 53061
Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111
|||||||||||||| || || || |||||||| |||||||| || |||||| | ||||||
Sbjct 53062 GTTGAAATTATTGCAAACGACCAGGGTAACAGGACTACTCCGTCCTATGTTGCCTTCACG 53121
Query 550112 GAAACTGAAC 550121
|| || ||||
Sbjct 53122 GACACCGAAC 53131
>seq1422
Length=293292
Score = 255 bits (282), Expect = 5e-62
Identities = 394/559 (70%), Gaps = 4/559 (1%)
Strand=Plus/Plus
Query 552018 GCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAA 552077
|||| ||||||||| | || ||| | || ||| || | |||| || ||| |
Sbjct 164745 GCCAGATTTGAAGAACTGTGCATGGATTTATTCAGATCCACTTTACAACCGGTGGAAAAG 164804
Query 552078 GTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGA 552137
| ||||| ||| | || || || ||| | ||| ||||| | || | ||||||||
Sbjct 164805 GCTTTAACCGATGCCAAAATGGACAAAGGAACAGTTCATGATGTAGTCTTAGTTGGTGGT 164864
Query 552138 TCTACAAGAATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAAT 552195
|| ||||||||||||||||| | | ||||| ||| ||| |||| ||| ||||
Sbjct 164865 TCAACAAGAATTCCTAAAATCCAAAAGATGTTGCAAGA-CTT-TTTCTGTGGAAAAACGC 164922
Query 552196 TAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTA 552255
||||| || | ||||||||||| || || || ||||| ||||| ||||||||||||
Sbjct 164923 TAAATCTTAGCATCAATCCAGATGAAGCCGTAGCATATGGCGCCGCTGTTCAAGCAGCTA 164982
Query 552256 TTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTC 552315
|| | |||| | ||| | || | ||| || || |||| |||||||| | ||
Sbjct 164983 TTTTAAGTGGAGATACTTCTTCTCAAATTCAAGATGTTTTACTGGTAGATGTCGCACCAT 165042
Query 552316 TATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTA 552375
| ||||| ||| | || || | ||||||| |||||||||| || | || ||||| | |
Sbjct 165043 TGTCTCTAGGTATTGAGACTGCTGGAGGTGTTATGACTAAACTGGTTGAAAGAAACTCCA 165102
Query 552376 CTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTA 552435
|| ||||| ||| || | | || | || |||||||| ||||| | |||||||
Sbjct 165103 GAATCCCTTGCAAACAACAACAAATCTTCACCACCTATTCAGACAATCAGAACGCTGTTA 165162
Query 552436 CAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTT 552495
| |||||| |||||||||| |||||| | || || |||||||| |||||||| |
Sbjct 165163 CCATTCAAGTTTTTGAAGGTGAAAGAGCTATGACCAAGGATAATAACTTGCTTGGTACCT 165222
Query 552496 TTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCG 552555
||||||| || || || ||||| ||| | ||||| || |||||||||| |||||||
Sbjct 165223 TTAATTTGACTGGAATCCCACCTGCGCCTAGAGGAGTTCCTAAAATTGAAGTCACTTTCG 165282
Query 552556 ATATCGATGCCAATGGAAT 552574
| | ||||| ||||| ||
Sbjct 165283 ACTTGGATGCTAATGGTAT 165301
>seq1411
Length=135556
Score = 116 bits (128), Expect = 3e-20
Identities = 123/160 (77%), Gaps = 4/160 (3%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTC 563314
|||||||| || | ||| | ||| ||| ||||| || ||||| |||| ||||| |
Sbjct 108805 AGACGGAGCACCAAATGTAAGGTGGACTCCTTTTGG--ATGTTGTAGTCAGAGAGAGTAC 108748
Query 563315 TTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTT 563374
| |||||||||||||||||| || || || | || |||||||| |||||||||||||
Sbjct 108747 GTCCATCTTCAAGTTGTTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATTCCTT 108688
Query 563375 CTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414
|||| ||||||||||| |||||| ||||| |||||
Sbjct 108687 CTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATC 108648
>seq97
Length=141497
Score = 111 bits (122), Expect = 1e-18
Identities = 122/160 (76%), Gaps = 2/160 (1%)
Strand=Plus/Minus
Query 550315 ATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGC 550374
|||| | || ||| | ||||| |||||||||||| |||||||| |||| || ||
Sbjct 93201 ATTTGCTCCCGAAGAGATTTCCGCTATGGTTTTAACAAAAATGAAGGAAACTGCTGAAGC 93142
Query 550375 TTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433
|| | |||| ||||| || || |||||||| | || || || || || ||||||||
Sbjct 93141 TTAT-TTGGGAAAGAAAGTCACCCATGCAGTAGTTACAGTGCCCGCGTACTTTAATGATG 93083
Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473
| |||||||||||||||||||||||||| ||||||||
Sbjct 93082 CCCAACGTCAAGCTACTAAAGATGCTGGTACCATTGCTGG 93043
Score = 89.7 bits (98), Expect = 4e-12
Identities = 127/178 (71%), Gaps = 3/178 (2%)
Strand=Plus/Minus
Query 550026 GTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAA 550085
||||||| || | |||||||| || ||||| || || |||||||||||||||||||
Sbjct 93549 GTGTTGGAGTGTACAAAAATGGTCGTGTGGAAATCATCGCTAATGATCAAGGTAACAGAA 93490
Query 550086 CTACTCCATCTTATGTTTCTTTCAC---GGAAACTGAACATTTAGTTGGTGATGCAGCAA 550142
|| || ||||| || | || || || ||||| | | |||| ||||| || |
Sbjct 93489 TAACACCTTCTTACGTGGCCTTTACTGGTGATGGTGAACGTCTTATTGGGGATGCCGCCA 93430
Query 550143 AATATCAAGCCACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGG 550200
|| ||||| ||| ||||| |||||| | |||||||||||||| | |||||
Sbjct 93429 AAAATCAATTGACTACAAATCCGGAAAATACTGTCTTTGATGCTAAACGACTCATTGG 93372
>seq340
Length=197767
Score = 107 bits (118), Expect = 2e-17
Identities = 140/194 (72%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448
||||| | | |||||| | || ||||| || |||||||| ||||| ||| | |||||||
Sbjct 16945 AAGTTTCCAAAGCAGTAGTCACAGTACCGGCTTATTTTAACGACTCCCAAAGGCAAGCTA 17004
Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTG 550508
|||| ||||| || ||||| || || | || | || || || || |||||||| |
Sbjct 17005 CTAAGGATGCAGGTACCATTGCAGGTCTCGACGTCCAACGAATAATAAACGAACCTACAG 17064
Query 550509 CTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCT 550568
|||| | | || ||||| || ||||| | | ||| |||||| | | || | || |
Sbjct 17065 CTGCCTCCATAGCGTATGGTCTAGATAAGAAAAGTGAAAAAGAACGTTACGTCTTGATTT 17124
Query 550569 TTGATTGTGGAGGT 550582
|||||| |||||||
Sbjct 17125 TTGATTTTGGAGGT 17138
Score = 102 bits (112), Expect = 7e-16
Identities = 247/366 (67%), Gaps = 10/366 (3%)
Strand=Plus/Plus
Query 551912 AACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971
|||||| |||||| |||| ||| || | | || | ||| || |||| || ||| |
Sbjct 17384 AACTGCATGCGAACGAGCGAAAAGAACATTGTCCACATCTACACAGGCCACAATCGAAAT 17443
Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031
||||| | ||| |||| ||| | | || || | ||| | |||| ||||| |||||
Sbjct 17444 TGATTCGATTGCTGATGGAAATGACTTTTATTCGTCGATTACTCGGGCGAAATTCGAAGA 17503
Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAA-CCAGTAGAACAAGTTTTAAGAGATT 552090
|| || ||| | |||| ||| |||| ||||| ||| | ||| | ||||
Sbjct 17504 AATCAACTCGGATATATTTAATTCCACA-TTGAGGCCAGTGGAAATGGCTTTGAAAGATG 17562
Query 552091 CAAAGATTG---ATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAA 552147
| ||| ||| | | ||| || || || | || | ||||||||||| || || |
Sbjct 17563 CTAAG-TTGCGCAAAGATCAAATCGAC--GATGTCGTCTTGGTTGGTGGATCAACTAGGA 17619
Query 552148 TTCCTAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGT 552206
| || ||||||| | | | ||| || | || ||| || || | || ||| |||||
Sbjct 17620 TACCAAAAATTCAAGCACTTTTACAGGGGATGTTCCAA-GGAAAGGAGTTGAATAAAAGT 17678
Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266
|||| || ||||| |||||||| |||||||| || ||||||| || ||| | ||||||
Sbjct 17679 ATTAACCCTGATGAAGCTGTTGCTTATGGTGCAGCTGTTCAAGCGGCAATTTTATCTGGA 17738
Query 552267 CAAACT 552272
| |||
Sbjct 17739 GACACT 17744
>seq4656
Length=6745
Score = 98.7 bits (108), Expect = 8e-15
Identities = 223/329 (68%), Gaps = 10/329 (3%)
Strand=Plus/Plus
Query 428086 TATTTTAGTTGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAAT 428145
||||||||| | || |||||||| || || | ||||||||| |||| ||| |||||
Sbjct 5414 TATTTTAGTCATCCACCCAGTTCCAATACCATCAGCACCATTTACCAGAACCATCGGAAT 5473
Query 428146 GACTGGTGCATAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAA-AA 428204
| ||| ||| | |||||||| | | |||||| ||||||| | ||| | ||
Sbjct 5474 AATGGGTATATACCAAACGGGTTCAATTTTCTGATTATCATCATATTC-ATGTGTTAGAA 5532
Query 428205 TATCAAAATCATGCTCGAT-AAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATA 428263
| ||| | | ||| |||||| | || | | | || |||||| |||
Sbjct 5533 GGGCGTCATCGTT-TGGATGAAATATCAAACGTGTCAGTGGAGACATTTTTGTAAAAATA 5591
Query 428264 TATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTA---GTTCCAAATTGTCCATTA 428320
||||| || ||||| || || || || || |||| | || |||||||| |||
Sbjct 5592 TATCTCGCACTTGCAGAGTCCTTTCCGCC---CATTAAACGGGTACCAAATTGACCACGT 5648
Query 428321 GGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTA 428380
|| |||||||||||||||||| ||||| ||| ||||||| || | ||| || |||||
Sbjct 5649 GGTTCCAATAAATTAATATTATTGCTTCCGACAAAATTTTGAGCAAGATTCACGATGGTC 5708
Query 428381 CTAGTTAAGGATTGTTCACCATGATGATA 428409
| | ||| |||||| ||||||||
Sbjct 5709 GCACAGAGAGATACTTCACCGTGATGATA 5737
>seq347
Length=95970
Score = 98.7 bits (108), Expect = 8e-15
Identities = 164/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 368817 AGGTTCTATGCCTTATGGTCAAATACATTATCCATTTGATAACGCAAAATACTTTGATAA 368876
|||||| |||||||||| ||| |||||||||||||| || ||||| | |||||
Sbjct 80544 AGGTTCGATGCCTTATGCGCAACAGCATTATCCATTTGAGAATGCAAAGGAATTTGA--- 80488
Query 368877 TGATAAAGATTATGTGGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTT 368936
| ||| ||| | || ||||| | ||||| ||||| ||||| ||||| |||||
Sbjct 80487 --AGAAA-ATTTTCCAGCCGATTTCATCGCAGAAGGGATTGACCAAACTCGTGGATGGTT 80431
Query 368937 TTATACCCTATTAGTATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAAT 368996
||||| || ||| | || || || | | | |||| | ||| ||||||| || |
Sbjct 80430 CTATACTTTAACAGTTCTTTCAACTGCCCTATATGGTAAAGCTCCTTATAAAAATTTAGT 80371
Query 368997 AGTAACTGGTATTGTTAAT-GCATCTGATGGTCAAAAGATGTCAAAAAGTAAG 369048
|| | |||| ||| || | || |||||||| || ||||||||| |||||
Sbjct 80370 GGTCAATGGT-TTGGTACTGGCTGGAGATGGTCAGAAAATGTCAAAACGTAAG 80319
>seq820
Length=22770
Score = 96.9 bits (106), Expect = 3e-14
Identities = 167/239 (70%), Gaps = 8/239 (3%)
Strand=Plus/Minus
Query 685282 tttttttAAGATCGAGGAAAAAATAAATATCTGCATGCCAAGGTTCAATATAAATAGCAA 685341
||||||| |||| | || | ||| ||| |||||||| ||||| | ||||||||| |
Sbjct 20001 TTTTTTTGAGATTCAAAAAGTCAAAAACATCCGCATGCCATGGTTCCAAATAAATAGCGA 19942
Query 685342 ATGAACCAGCTCTTTTG---CCTCCTTGATTGGCATACCTCGATATATTATTAAATACAG 685398
| | |||| |||||| || || |||| |||| | | |||||||||| ||
Sbjct 19941 AAGCTCCAGGTCTTTTATTACCACCCTGATCCACATATTTGGCAGTATTATTAAACACTT 19882
Query 685399 TTA--ATACT--CGTAGACCACTTGCTGTGCCTTGTGTAGAATTAATATAAGATCCATCC 685454
| | ||| || |||||| | | ||||| | ||| | |||||||| || |
Sbjct 19881 TAAGCATAGGAACG-AGACCATTGGAAGTGCCATTTGTGCCAGCAATATAAGTGCCTTGT 19823
Query 685455 GCCCTAATATTTGAAACATTTACACCAATTCCACCAGCATATTTACTAATCATAGCACA 685513
|| |||||||| |||||||||||||||||| || |||| ||| ||| ||||||||
Sbjct 19822 GCTCTAATATTATGAACATTTACACCAATTCCTCCTGCATTTTTTGAAATGATAGCACA 19764
>seq970
Length=61088
Score = 95.1 bits (104), Expect = 1e-13
Identities = 115/154 (75%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 394007 GTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTA 394066
|| ||||||||| ||| || | ||| ||||| | ||| | || |||| || |
Sbjct 5083 GTAACAATTTCAGGAAACGTCATATTTTGAGCAATGCTCCTTGGAACGCCAACTTGATCA 5024
Query 394067 A-GAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCC 394125
| | |||| || ||||| | |||||||| ||||| | || | ||| |||||||| ||
Sbjct 5023 ATGCGCAAG-TTAGGATCTGGTGTAATAACCGTACGTGCAGAGAAATCGACACGTTTCCC 4965
Query 394126 CATAAGATTTCCACGAATTCTACCTTCTTTACCT 394159
|||||| || ||||||||||||||||||||||||
Sbjct 4964 CATAAGGTTACCACGAATTCTACCTTCTTTACCT 4931
>seq1585
Length=20535
Score = 91.5 bits (100), Expect = 1e-12
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459
|| ||| | ||||| |||||||||||||| || || ||| | || ||||| |||||||||
Sbjct 17098 GCCGTAGTTACTGTTCCAGCATATTTTAACGATTCTCAAAGACAGGCTACAAAAGATGCT 17157
Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTT 550519
|| | || |||| | ||||| | | | |||||||| || ||||| ||||| ||
Sbjct 17158 GGTCAAATATCTGGTTTGAATGTGTTGAGAGTGATCAATGAGCCCACTGCCGCTGCTCTG 17217
Query 550520 GCATATGGACTTGATAAA 550537
|| ||||| | ||||||
Sbjct 17218 GCTTATGGCATGGATAAA 17235
>seq4867
Length=118623
Score = 89.7 bits (98), Expect = 4e-12
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369
|||| |||| | || ||| |||| |||||| | |||| ||||||||| | || ||
Sbjct 108023 AAACGATTTGCTCCCGAAGAAATCAGCTCTATGATCTTAACAAAAATGAAAGATACCGCA 107964
Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429
|||| | | |||| | | | || ||||| || ||||| || ||||| |||||||||
Sbjct 107963 GAAGCTTATTTAGGTCGAAATATCACTGATGCGGTTATAACAGTTCCAGCTTATTTTAAT 107904
Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473
|| ||| | ||||| || |||||||| ||| |||||| ||
Sbjct 107903 GATAGTCAAAGGCAAGCCACCAAAGATGCAGGAACTATTGCAGG 107860
Score = 87.8 bits (96), Expect = 1e-11
Identities = 144/208 (69%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 552289 ATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTA 552348
|| || || | || || || || ||| | ||| | ||| | || || | |||||| | |
Sbjct 106192 ATGTTTTATTGGTTGACGTAACACCTTTGTCTTTGGGTATTGAGACCGCTGGAGGAGTAA 106133
Query 552349 TGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTA 552408
|| | || || | || |||||| | | |||||||||||| || | | ||| | |
Sbjct 106132 TGTCAAAAATTGTTGAAAGAAATGCAAGGATTCCTTGTAAACAAACACAAACCTTTACCA 106073
Query 552409 CGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCA 552468
| ||||| || || ||| | |||||||| |||||| | |||||||| |||||| | |
Sbjct 106072 CATATTCGGACAACCAACCCGCTGTTACCATTCAAGTGTTTGAAGGTGAAAGAGCGATGA 106013
Query 552469 CTAAAGATAATAATCAACTTGGTACTTT 552496
| || ||||| |||| | | || | |||
Sbjct 106012 CCAAGGATAACAATCTATTAGGCAATTT 105985
>seq4409
Length=33873
Score = 86.0 bits (94), Expect = 5e-11
Identities = 155/223 (70%), Gaps = 4/223 (2%)
Strand=Plus/Minus
Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313
|| || || || || | ||| | |||| ||| || |||||| ||||| | | |||
Sbjct 17977 CTCAGTCGAAGCACCAAATGTAAGGTAGATTCCTTTTGAATATTATAATCGGACAAAGTC 17918
Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373
| | ||||| |||||||| ||||| || || | ||| ||||| || || |||||||||
Sbjct 17917 CGTCCGTCTTCCAGTTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGCGGAATTCCT 17858
Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGA 563431
|| || || ||||||||| ||||| ||||| || || | || | || || |
Sbjct 17857 TCCTTGTCCTGAATTTTTGCCTTTACATTTTCAATAGTGTCCGACGGTTCG-AC-CTCAA 17800
Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474
|||| | || || || || | || || |||||||| |||||
Sbjct 17799 GAGTGATGGTCTTGCCCGTTAAGGTCTTTACGAAAATCTGCAT 17757
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4028455347829040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |