Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq1411 100 2e-16
>seq1411
Length=135556
Score = 100 bits (110), Expect = 2e-16
Identities = 126/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299
||||| || | | ||| | || ||||| | ||| || || ||||| || ||||| ||
Sbjct 108817 TTTCCACCACGAAGACGGAGCACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCA 108758
Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359
| || ||| | |||| || | ||| || || || || ||||| | ||| ||||| ||
Sbjct 108757 GAGAGAGTACGTCCATCTTCAAGTTGTTTTCCAGCGAAGATCAACCTCTGCTGATCTGGA 108698
Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGA 101412
||||| |||||||| ||||||||||| ||||||| |||| | ||| || ||
Sbjct 108697 GGAATTCCTTCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTATCGGA 108645
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 101279 TCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAAT 101338
||||||||||| ||||| || | | || | | | || || | || ||||| || ||
Sbjct 105890 TCTTTTTGTATGTTGTAGTCTGATAGGGTGCGGCCGTCTTCAAGCTGTTTACCAGCGAAG 105831
Query 101339 ATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATT 101398
|| | ||| ||||| || || || || ||||| || || ||||| ||| ||| || ||
Sbjct 105830 ATGAGACGTTGTTGGTCTGGGGGGATCCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTT 105771
Query 101399 TCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACA 101458
|| | |||||| || | ||| ||||| | |||| ||||| || || | ||||| ||
Sbjct 105770 TCGATAGTGTCGGAAGGTTCAACTTCCAATGTGATGGTTTTACCAGTAAGGGTTTTCACG 105711
Query 101459 AATATCTGCAT 101469
|| ||||||||
Sbjct 105710 AAAATCTGCAT 105700
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|||||||| || | |||||| || || ||||| ||||||||||| |||||||| || |
Sbjct 108334 CCTCCTCTCAATCTTAAAACCAAGTGGAGGGTGGATTCTTTTTGAATATTGTAGTCTGAA 108275
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGA 101353
| || | |||| |||||||| || || || || || ||||| ||||||
Sbjct 108274 AGGGTACGACCATCTTCCAATTGTTTTCCAGCGAAGATTAAACGTTGTTGA 108224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396201627994872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |