Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq4656 82.4 1e-10
>seq4656
Length=6745
Score = 82.4 bits (90), Expect = 1e-10
Identities = 140/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058
|||| ||||| ||| | ||| | || || ||||| | | |||| | |||||||||
Sbjct 5781 TTAAAGTTGCCCAACTGGCTGGTTCAGTAGCTGAACATTCGGCCTATCATCACGGTGAAG 5722
Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118
| | | |||| || || | || |||| ||| ||||||| || | ||||||||
Sbjct 5721 TATCTCTCTGTGCGACCATCGTGAATCTTGCTCAAAATTTTGTCGGAAGCAATAATATTA 5662
Query 163119 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGG 163178
||| | ||||| |||||||||||||||| | ||| || || || || |||||
Sbjct 5661 ATTTATTGGAACCACGTGGTCAATTTGGTACCCGTTTAATGGGCGGAAAGGACTCTGCAA 5602
Query 163179 CATCAAGATATATTTATACCAAA 163201
| |||||||||| ||| |||
Sbjct 5601 GTGCGAGATATATTTTTACAAAA 5579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635051390210880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |