Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq4656 82.4 1e-10 >seq4656 Length=6745 Score = 82.4 bits (90), Expect = 1e-10 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 162999 TTAAGGTTGCTCAATTAAGTGGGTATGTTGCGGAACAAACAGACTATAAACACGGTGAAC 163058 |||| ||||| ||| | ||| | || || ||||| | | |||| | ||||||||| Sbjct 5781 TTAAAGTTGCCCAACTGGCTGGTTCAGTAGCTGAACATTCGGCCTATCATCACGGTGAAG 5722 Query 163059 AAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATAG 163118 | | | |||| || || | || |||| ||| ||||||| || | |||||||| Sbjct 5721 TATCTCTCTGTGCGACCATCGTGAATCTTGCTCAAAATTTTGTCGGAAGCAATAATATTA 5662 Query 163119 CATTACTTGAACCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTGCGG 163178 ||| | ||||| |||||||||||||||| | ||| || || || || ||||| Sbjct 5661 ATTTATTGGAACCACGTGGTCAATTTGGTACCCGTTTAATGGGCGGAAAGGACTCTGCAA 5602 Query 163179 CATCAAGATATATTTATACCAAA 163201 | |||||||||| ||| ||| Sbjct 5601 GTGCGAGATATATTTTTACAAAA 5579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635051390210880