Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq820 140 8e-28
>seq820
Length=22770
Score = 140 bits (154), Expect = 8e-28
Identities = 135/171 (79%), Gaps = 2/171 (1%)
Strand=Plus/Plus
Query 110829 GAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAA 110888
|||||| ||||| | |||||||||||||| | |||||| | |||||||||||||||
Sbjct 20933 GAAGAATTGAGAGCCAGAGATTTATTTTATGCCCTATGGATTCCGGATTTATTCATGAAA 20992
Query 110889 CGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCT 110948
|| ||| || | |||| | ||||| || ||||||||||||| || |||||||| ||
Sbjct 20993 CGAGTTGAATCAGATGGAGTATGGTCGCTGATGTGTCCTCATCAATCCCCTGGTCTTTCG 21052
Query 110949 GATGTATATGGAAAAGAGTTTGAAGACCTT-TACGAAAAATATGAAAAAGA 110998
||| ||||| ||||| || ||| || || |||||||| |||||||||||
Sbjct 21053 GATTGCTATGGTAAAGAATTCGAA-ACGTTATACGAAAAGTATGAAAAAGA 21102
Score = 132 bits (146), Expect = 1e-25
Identities = 288/424 (68%), Gaps = 8/424 (2%)
Strand=Plus/Plus
Query 110400 GGTATTCATGGACATGATATTAAAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAG 110459
|| ||||||||| | || ||| | || | ||||||| ||| || ||| | | |||
Sbjct 19581 GGCATTCATGGAGAGGACATTGAGGCCGCTATTGAAACTTACAAT-TATCTATCACAAAA 19639
Query 110460 AAAGCT-ATTCATGCTACTCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGC 110518
| | | | ||||| | |||||| ||||||| |||| || || ||||||| |
Sbjct 19640 ATATTTCACGCATGCCAGTCCTACGTTATTTAATGCAGCTACACCAAGACCACAATTGTC 19699
Query 110519 TTCTTGCTTTCTT-CTAGGAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTA 110577
|||||| |||||| ||| || || ||| | |||| || ||||| | ||| |
Sbjct 19700 TTCTTG-TTTCTTGCTAATGATGCCTGAGGATAGTCTTGAGGGAATTTACAAGTGTCTCA 19758
Query 110578 AAGAAACTGCTCTTATTTCTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTC 110637
|| |||| | ||||| ||||| | |||||||||||| | | |||||| |||||
Sbjct 19759 CTCAATGTGCTATCATTTCAAAAAATGCAGGAGGAATTGGTGTAAATGTTCATAATATTA 19818
Query 110638 GCTCAAAAGGAGCAAATATCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGT 110697
| || |||| | |||| || | || || |||| | ||| || ||||| |||
Sbjct 19819 GAGCACAAGGCACTTATATTGCTGGCACAAATGGCACTTCCAATGGTCTCGTTCCTATGC 19878
Query 110698 TAAGAGTCTTCAACGACACTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCT 110754
| | ||| || || | ||||| ||||||||| |||| ||||| ||| ||| |||
Sbjct 19879 TTAAAGTGTTTAATAATACTGCCAAATATGTGGATCAGGGTGGTAATAAAAGACCTGGAG 19938
Query 110755 CATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTA 110814
| || ||||| ||| | ||||| |||||| | ||| | ||||| || || ||| || |
Sbjct 19939 CTTTCGCTATTTATTTGGAACCATGGCATGCGGATGTTTTTGACTT-TTTGAATCTCAAA 19997
Query 110815 AAAA 110818
||||
Sbjct 19998 AAAA 20001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186571084804056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |