Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1411 120 3e-22 >seq1411 Length=135556 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 131933 TCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992 |||||||| ||||||||||| | ||| || ||||| ||||||||||| | || Sbjct 105890 TCTTTTTGTATGTTGTAGTCTGATAGGGTGCGGCCGTCTTCAAGCTGTTTACCAGCGAAG 105831 Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052 || ||||| ||||| ||||| || || ||||| || || ||| ||| ||||| | | Sbjct 105830 ATGAGACGTTGTTGGTCTGGGGGGATCCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTT 105771 Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112 || | ||| |||| || || ||||| | || | ||||||||||| || ||||| | | Sbjct 105770 TCGATAGTGTCGGAAGGTTCAACTTCCAATGTGATGGTTTTACCAGTAAGGGTTTTCACG 105711 Query 132113 AAAATCTGCAT 132123 ||||||||||| Sbjct 105710 AAAATCTGCAT 105700 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||||| | | ||||| ||||| ||||||||||| | ||||| |||||| Sbjct 108796 ACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCATCTTCA 108737 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| || | |||| | | ||| ||||||||||| || |||||||| || | Sbjct 108736 AGTTGTTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGA 108677 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGG 132065 ||||| ||| | | ||| | |||||||| Sbjct 108676 ATTTTGGCTTTTACATTTTCAATAGTATCGG 108646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476516497354560