Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq1411 120 3e-22
>seq1411
Length=135556
Score = 120 bits (132), Expect = 3e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 131933 TCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992
|||||||| ||||||||||| | ||| || ||||| ||||||||||| | ||
Sbjct 105890 TCTTTTTGTATGTTGTAGTCTGATAGGGTGCGGCCGTCTTCAAGCTGTTTACCAGCGAAG 105831
Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052
|| ||||| ||||| ||||| || || ||||| || || ||| ||| ||||| | |
Sbjct 105830 ATGAGACGTTGTTGGTCTGGGGGGATCCCTTCCTTGTCCTGAATCTTTGCTTTCACGTTT 105771
Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112
|| | ||| |||| || || ||||| | || | ||||||||||| || ||||| | |
Sbjct 105770 TCGATAGTGTCGGAAGGTTCAACTTCCAATGTGATGGTTTTACCAGTAAGGGTTTTCACG 105711
Query 132113 AAAATCTGCAT 132123
|||||||||||
Sbjct 105710 AAAATCTGCAT 105700
Score = 87.8 bits (96), Expect = 2e-12
Identities = 110/151 (73%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||||||||| | | ||||| ||||| ||||||||||| | ||||| ||||||
Sbjct 108796 ACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCATCTTCA 108737
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| ||||| || | |||| | | ||| ||||||||||| || |||||||| || |
Sbjct 108736 AGTTGTTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATTCCTTCTTTGTCTTGA 108677
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGG 132065
||||| ||| | | ||| | ||||||||
Sbjct 108676 ATTTTGGCTTTTACATTTTCAATAGTATCGG 108646
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476516497354560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |