Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2028 98.7 1e-14
>seq2028
Length=154558
Score = 98.7 bits (108), Expect = 1e-14
Identities = 316/482 (66%), Gaps = 14/482 (3%)
Strand=Plus/Minus
Query 1455798 GCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGA--CACGGTCCACT 1455855
|| || || ||||||||||| ||||||| || |||||| | || ||| ||||
Sbjct 60599 GCTGAAGCTTCCTTTTGGACTACCGAGGAAGTGGACCTCACCCATGATCTACG--ACACT 60542
Query 1455856 GGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCC 1455915
||| | |||| || || || |||||||| |||||| | | ||||||| ||
Sbjct 60541 GGGAGAAACTGAAATCTGAAGAACGACATTTCATTTCGCACGTGTTAG-CTTTTTTTGCT 60483
Query 1455916 GCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTG 1455975
||| ||||| || || ||||| || | | || || | |||| || ||| ||
Sbjct 60482 GCCTCAGATGGTATTGTAAATGAGAATCTTGTGGAACGTTTCAGTCAAGAAGTTCAAGTG 60423
Query 1455976 CCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACC 1456035
| || || |||| ||||| || |||||||| || || ||||| ||||| |||||||
Sbjct 60422 ACTGAAGCTCGTTGTTTTTATGGATTCCAGATTGCAATTGAAAATATCCATTCTGAAATG 60363
Query 1456036 TACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGC 1456095
||| || || || || || ||| || || || || || | | ||| |
Sbjct 60362 TACAGCAAACTTATTGAAACGTATATCAGCGATCCCAATGAAAAAGAGTTCTTGTTTAAC 60303
Query 1456096 GCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCA-- 1456153
|| || || || |||||| || | ||| || || || ||||| | |||||||| |
Sbjct 60302 GCTATTGAAACCATGCCGTGTGTTAAGAAGAAAGCTGATTGGGCCCTAAAGTGGATTAGC 60243
Query 1456154 ACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTGCCG-CGTCGAGGGCAT 1456212
| | | ||||| || | ||| | | || | ||||| | ||| || |||||
Sbjct 60242 TCGAAAACATCCTCG----TTCGGCGAAAGATTGGTGGCTTTTGCTGCCGTTGAAGGCAT 60187
Query 1456213 CTTTTTCTCGGGCAGTTTCTGC-GCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCG 1456271
|||||| || || || ||| || || || ||| | ||||| || || || |||||||
Sbjct 60186 TTTTTTCAGTGGTAGCTT-TGCAGCGATTTTCTGGTTAAAGAAACGTGGTCTTATGCCCG 60128
Query 1456272 GT 1456273
||
Sbjct 60127 GT 60126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7176278001583152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |