Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq2259 96.9 2e-15
>seq2259
Length=79244
Score = 96.9 bits (106), Expect = 2e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||||||||| ||||||||||| ||||| || || || |||| |||||| ||
Sbjct 78288 ATGCAAATTTTCGTGAAAACTCTCACTGGTAAGACCATCACCCTTGAGGTCGAACCATCC 78229
Query 27850 GACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| || | ||| || || ||||| |||||||||||| | || || |
Sbjct 78228 GACACCATTGAAAAT--GTAAAGGCGAAAATTCAGGACAAAGAAGGTATCCCCCCAGACC 78171
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||||| || || ||||| || |||||| |||| || | |||| | | ||||| || |
Sbjct 78170 AACAACGTTTGATCTTTGCTGGTAAACAACTGGAGGATGGTCGCACCCTCTCCGACTATA 78111
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGT 27998
| |||||||| ||| ||| |||| |||||
Sbjct 78110 ATATCCAAAAGGAGTCCACCCTGCACTTGGT 78080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355793457887592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |