Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq4409 131 4e-25
seq1411 89.7 1e-12
>seq4409
Length=33873
Score = 131 bits (144), Expect = 4e-25
Identities = 162/222 (73%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943
|| |||| || || | ||| | ||||| || ||||| || || ||||||| |||||
Sbjct 17977 CTCAGTCGAAGCACCAAATGTAAGGTAGATTCCTTTTGAATATTATAATCGGACAAAGTC 17918
Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003
| || ||||| || ||| ||||||||||| | ||||||||||| | || ||||||
Sbjct 17917 CGTCCGTCTTCCAGTTGTTTGCCGGCGAAGATCAATCTCTGCTGGTCTGGCGGAATTCCT 17858
Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063
||||| || ||||||||| || ||| | || | |||| || || || ||||||
Sbjct 17857 TCCTTGTCCTGAATTTTTGCCTTTACATTTTCAATAGTGTCCGACGGTTCGACCTCAAGA 17798
Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105
|| || || |||||||| | ||||| ||||| | |||||||
Sbjct 17797 GTGATGGTCTTGCCCGTTAAGGTCTTTACGAAAATCTGCATT 17756
>seq1411
Length=135556
Score = 89.7 bits (98), Expect = 1e-12
Identities = 97/129 (75%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || | ||| | || ||||| |||||||||||||| || | | ||| | |||||
Sbjct 108800 GAGCACCAAATGTAAGGTGGACTCCTTTTGGATGTTGTAGTCAGAGAGAGTACGTCCATC 108741
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
||| || ||| || |||||||| | ||||||||| || | | |||||||| || ||
Sbjct 108740 TTCAAGTTGTTTTCCAGCGAAGATCAACCTCTGCTGATCTGGAGGAATTCCTTCTTTGTC 108681
Query 152012 TTGAATTTT 152020
|||||||||
Sbjct 108680 TTGAATTTT 108672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153585804202216
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |