Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22] 15,896 sequences; 151,272,366 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq173 89.7 7e-13 >seq173 Length=58411 Score = 89.7 bits (98), Expect = 7e-13 Identities = 128/179 (72%), Gaps = 6/179 (3%) Strand=Plus/Minus Query 50631 GCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAA 50690 || |||||||| || ||| | | ||| | | |||| || || ||| |||| || Sbjct 29386 GCATGGAATCCTACGGATCTCCCTGAAATGGCTCTACCGCCTTGCCATTGTTTAGTGCAG 29327 Query 50691 TTTTATGCCACAGACAATGTT---TTATCCTGTCAATGTTATCAAAGATCAGCTGATATG 50747 ||||||| | ||||| | ||||||||||| | ||||| ||||||||||||||| Sbjct 29326 TTTTATGTGGC---CAATGGTGAATTATCCTGTCAGTTATATCAGAGATCAGCTGATATG 29270 Query 50748 GGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806 || | || |||||||| || | ||| || ||||| ||||| ||| |||| ||||| Sbjct 29269 GGACTTGGAGTTCCTTTTAATATTGCTAGCTATGCTTTGTTAACTTATATGATAGCTCA 29211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666942652157760