Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hypothenemus_20hampei_20[genbank_20GCA_5F001012855.1_202015-05-22]
15,896 sequences; 151,272,366 total letters
Query= NC_033423.1
Length=208501
Score E
Sequences producing significant alignments: (Bits) Value
seq173 89.7 7e-13
>seq173
Length=58411
Score = 89.7 bits (98), Expect = 7e-13
Identities = 128/179 (72%), Gaps = 6/179 (3%)
Strand=Plus/Minus
Query 50631 GCCTGGAATCCAACCGATATAGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAA 50690
|| |||||||| || ||| | | ||| | | |||| || || ||| |||| ||
Sbjct 29386 GCATGGAATCCTACGGATCTCCCTGAAATGGCTCTACCGCCTTGCCATTGTTTAGTGCAG 29327
Query 50691 TTTTATGCCACAGACAATGTT---TTATCCTGTCAATGTTATCAAAGATCAGCTGATATG 50747
||||||| | ||||| | ||||||||||| | ||||| |||||||||||||||
Sbjct 29326 TTTTATGTGGC---CAATGGTGAATTATCCTGTCAGTTATATCAGAGATCAGCTGATATG 29270
Query 50748 GGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGATCGCTCA 50806
|| | || |||||||| || | ||| || ||||| ||||| ||| |||| |||||
Sbjct 29269 GGACTTGGAGTTCCTTTTAATATTGCTAGCTATGCTTTGTTAACTTATATGATAGCTCA 29211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 666942652157760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |